Related Experiment Video
Updated: Jul 3, 2026

Identification of Nucleolar Factors During HIV-1 Replication Through Rev Immunoprecipitation and Mass Spectrometry
Published on: June 26, 2019
Human immunodeficiency virus type 1 Vpr-binding protein VprBP, a WD40 protein associated with the DDB1-CUL4 E3
Chad M McCall1, Paula L Miliani de Marval, Paul D Chastain
1Department of Biochemistry and Biophysics, University of North Carolina School of Medicine, Chapel Hill, North Carolina 27599, USA.
Insights
VprBP is crucial for DNA replication and cell cycle progression. Its disruption leads to S-phase defects, embryonic lethality, and suggests HIV-1 Vpr may hijack this process for viral replication.
Area of Science:
- Molecular Biology
- Cell Biology
- Virology
Background:
- Damaged DNA binding protein 1 (DDB1) forms E3 ligase complexes with WD40 repeat proteins (DWDs).
- Vpr-binding protein (VprBP) is a DWD protein implicated in HIV-1 Vpr-induced G2 cell cycle arrest, but its cellular function is unknown.
Purpose of the Study:
- To characterize the cellular function of VprBP.
- To investigate the role of VprBP in DNA replication and cell cycle progression.
- To explore the potential link between VprBP function and HIV-1 replication.
Main Methods:
- Co-immunoprecipitation assays to determine protein interactions.
- Western blotting to analyze protein levels during the cell cycle.
- Chromatin immunoprecipitation to assess DNA binding.
- siRNA-mediated silencing and gene deletion in cell lines and mouse models.
- Flow cytometry to analyze cell cycle progression.
Main Results:
- VprBP interacts with DDB1, CUL4A, and other components of the COP9/signalsome.
- VprBP levels fluctuate during the cell cycle, decreasing during mitosis.
- VprBP binds to chromatin in a cell cycle-dependent manner, peaking in G2.
- VprBP depletion impairs DNA replication, causes S-phase arrest, inhibits proliferation, and leads to embryonic lethality in mice.
- Conditional deletion in mouse embryonic fibroblasts results in S-phase defects and apoptosis.
Conclusions:
- VprBP plays a critical, previously unrecognized role in S-phase progression and DNA replication.
- HIV-1 Vpr may exploit VprBP's function in chromosomal replication to enhance viral replication.
- VprBP is essential for embryonic development and cell proliferation.
Abstract:
Damaged DNA binding protein 1, DDB1, bridges an estimated 90 or more WD40 repeats (DDB1-binding WD40, or DWD proteins) to the CUL4-ROC1 catalytic core to constitute a potentially large number of E3 ligase complexes. Among these DWD proteins is the human immunodeficiency virus type 1 (HIV-1) Vpr-binding protein VprBP, whose cellular function has yet to be characterized but has recently been found to mediate Vpr-induced G(2) cell cycle arrest. We demonstrate here that VprBP binds stoichiometrically with DDB1 through its WD40 domain and through DDB1 to CUL4A, subunits of the COP9/signalsome, and DDA1. The steady-state level of VprBP remains constant during interphase and decreases during mitosis. VprBP binds to chromatin in a DDB1-independent and cell cycle-dependent manner, increasing from early S through G(2) before decreasing to undetectable levels in mitotic and G(1) cells. Silencing VprBP reduced the rate of DNA replication, blocked cells from progressing through the S phase, and inhibited proliferation. VprBP ablation in mice results in early embryonic lethality. Conditional deletion of the VprBP gene in mouse embryonic fibroblasts results in severely defective progression through S phase and subsequent apoptosis. Our studies identify a previously unknown function of VprBP in S-phase progression and suggest the possibility that HIV-1 Vpr may divert an ongoing chromosomal replication activity to facilitate viral replication.
More Related Videos
Related Concept Videos
Restarting Stalled Replication Forks
Inhibitors of Virion Maturation and Assembly
Single-Strand DNA Binding Proteins
Negative Regulator Molecules
The Replisome
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with the...
DNA Damage can Stall the Cell Cycle

