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Updated: Jul 3, 2026

Design and Use of a Low Cost, Automated Morbidostat for Adaptive Evolution of Bacteria Under Antibiotic Drug Selection
Published on: September 27, 2016
Multirate state and parameter estimation in an antibiotic fermentation with delayed measurements.
1Department of Chemical Engineering, University of Alberta, Edmonton T6G 2G6, Canada.
This study introduces a new method to monitor fermentation processes by combining endogenous decay and maintenance into a modified coefficient. This approach improves the estimation of biomass and growth rates, even with delayed measurements.
Area of Science:
- Biotechnology
- Biochemical Engineering
- Process Monitoring
Background:
- Traditional software sensors like the extended Kalman filter (EKF) struggle with fermentation processes exhibiting endogenous metabolism and time-varying maintenance.
- These culture-related activities complicate accurate estimation and monitoring of critical fermentation parameters.
Purpose of the Study:
- To develop a robust multirate software sensor-based estimation strategy for monitoring fermentation processes.
- To address the limitations of traditional algorithms in handling complex metabolic activities.
- To accurately estimate biomass and specific growth rates in fed-batch fermentations.
Main Methods:
- Lumped endogenous decay and maintenance into a modified maintenance coefficient, m(c).
- Developed model equations relating measurable outputs (CER, biomass) to observable parameters (net specific growth rate, modified maintenance coefficient).
- Implemented a multirate estimation strategy accommodating delayed biomass measurements and frequent CER measurements.
Main Results:
- Successfully monitored biomass profiles and critical fermentation parameters, including specific growth rate.
- Demonstrated the effectiveness of the modified maintenance coefficient approach.
- Validated the multirate software sensor strategy in a fed-batch fermentation of Streptomyces clavuligerus.
Conclusions:
- The proposed multirate software sensor strategy effectively monitors fermentation processes with endogenous metabolism and time-varying maintenance.
- The modified maintenance coefficient approach enhances the accuracy of biomass and growth rate estimations.
- This method offers a reliable solution for complex fermentation monitoring challenges.
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