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Micron-scale Resolution Optical Tomography of Entire Mouse Brains with Confocal Light Sheet Microscopy
Published on: October 8, 2013
High resolution localized two-dimensional MR spectroscopy in mouse brain in vivo
Niels Braakman1, Thomas Oerther, Huub J M de Groot
1SSNMR, Leiden Institute of Chemistry, Gorlaeus Laboratoria, Leiden, The Netherlands.
Magnetic Resonance in Medicine
|July 31, 2008
Summary
Localized two-dimensional MR spectroscopy (2D MRS) now works in mouse brains. This breakthrough enables precise measurement of brain metabolites in vivo, aiding neurological disorder research.
Area of Science:
- Neuroscience
- Biomedical Engineering
- Magnetic Resonance Imaging
Background:
- Localized two-dimensional MR spectroscopy (2D MRS) enhances in vivo brain metabolite studies with improved spectral resolution and assignment.
- Previous limitations prevented localized 2D MRS in mouse brains due to size constraints, despite numerous available transgenic models for neurological disorders.
Purpose of the Study:
- To optimize a localized 2D proton chemical shift correlated spectroscopic sequence for in vivo mouse brain studies at 9.4T.
- To demonstrate the feasibility of localized 2D MRS in the mouse brain for metabolite analysis.
Main Methods:
- Optimization of a localized 2D proton chemical shift correlated spectroscopic sequence.
- Utilized a 9.4T high field strength and a strong gradient system.
- Implemented efficient water suppression and a short echo time for enhanced spectral quality.
Main Results:
- Achieved highly resolved 2D spectra from localized regions in mouse brains in vivo.
- Successfully detected and assigned cross-peaks for up to 16 brain metabolites.
- This marks the first in vivo 2D MRS study of the mouse brain, enabling simultaneous metabolite resonance assignment.
Conclusions:
- Localized 2D MRS is now feasible in the mouse brain in vivo.
- This technique will be invaluable for identifying novel biomarkers in neurological disease progression and treatment using mouse models.

