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Updated: Jul 3, 2026

Simple and Fast Rolling Circle Amplification-Based Detection of Topoisomerase 1 Activity in Crude Biological Samples
Published on: December 2, 2022
Par-4 binds to topoisomerase 1 and attenuates its DNA relaxation activity
Anindya Goswami1, Shirley Qiu, Thomas S Dexheimer
1Department of Radiation Medicine, Graduate Center for Toxicology, University of Kentucky, Lexington, Kentucky 40536, USA.
Abstract:
The regulation of DNA relaxation by topoisomerase 1 (TOP1) is essential for DNA replication, transcription, and recombination events. TOP1 activity is elevated in cancer cells, yet the regulatory mechanism restraining its activity is not understood. We present evidence that the tumor suppressor protein prostate apoptosis response-4 (Par-4) directly binds to TOP1 and attenuates its DNA relaxation activity. Unlike camptothecin, which binds at the TOP1-DNA interface to form cleavage complexes, Par-4 interacts with TOP1 via its leucine zipper domain and sequesters TOP1 from the DNA. Par-4 knockdown by RNA interference enhances DNA relaxation and gene transcription activities and promotes cellular transformation in a TOP1-dependent manner. Conversely, attenuation of TOP1 activity either by RNA interference or Par-4 overexpression impedes DNA relaxation, cell cycle progression, and gene transcription activities and inhibits transformation. Collectively, our findings suggest that Par-4 serves as an intracellular repressor of TOP1 catalytic activity and regulates DNA topology to suppress cellular transformation.
Insights
The tumor suppressor Par-4 protein inhibits DNA relaxation by topoisomerase 1 (TOP1), a key enzyme in cancer. This interaction prevents uncontrolled DNA topology changes, suppressing cellular transformation.
Area of Science:
- Molecular Biology
- Cancer Biology
- Biochemistry
Background:
- Topoisomerase 1 (TOP1) activity is crucial for DNA metabolism but is often dysregulated in cancer.
- The mechanisms regulating TOP1 activity, particularly inhibitory pathways, remain largely unknown.
- Identifying regulators of TOP1 is essential for understanding cancer progression and developing therapeutic strategies.
Purpose of the Study:
- To investigate the role of the tumor suppressor protein prostate apoptosis response-4 (Par-4) in regulating TOP1 activity.
- To elucidate the mechanism by which Par-4 interacts with and modulates TOP1 function.
- To determine the impact of the Par-4/TOP1 interaction on DNA topology, gene transcription, and cellular transformation.
Main Methods:
- Co-immunoprecipitation assays to demonstrate direct binding between Par-4 and TOP1.
- In vitro DNA relaxation assays to measure TOP1 catalytic activity.
- RNA interference (RNAi) to knock down Par-4 or TOP1 expression.
- Analysis of gene transcription, cell cycle progression, and cellular transformation assays.
Main Results:
- Par-4 directly binds to TOP1 through its leucine zipper domain, sequestering it from DNA.
- Par-4 attenuates TOP1-mediated DNA relaxation activity, distinct from camptothecin's mechanism.
- Par-4 knockdown enhances TOP1 activity, leading to increased DNA relaxation, gene transcription, and cellular transformation.
- Overexpression of Par-4 or attenuation of TOP1 inhibits DNA relaxation, cell cycle progression, and transformation.
Conclusions:
- Par-4 acts as an endogenous repressor of TOP1 catalytic activity.
- The Par-4-mediated regulation of TOP1 is critical for maintaining DNA topology and suppressing cellular transformation.
- Targeting the Par-4/TOP1 interaction may offer novel therapeutic avenues for cancer treatment.
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