COX2 and p53 risk-alleles coexist in COPD
Ehtesham Arif1, Arpana Vibhuti, Desh Deepak
1Functional Genomics Unit, Institute of Genomics and Integrative Biology, Delhi, India.
Summary
Genetic variations in COX2 and p53 influence susceptibility to Chronic Obstructive Pulmonary Disease (COPD). Specific COX2 and p53 risk-alleles and their combinations are associated with increased COPD risk.
Area of Science:
- Genetics
- Pulmonology
- Molecular Biology
Background:
- Cigarette smoke triggers pro-inflammatory cytokines from airway epithelial cells, affecting inflammation-related genes like COX2.
- p53 expression is altered in response to cigarette smoke, and it shares functions with COX2 in inflammation and oxidative stress.
Purpose of the Study:
- To investigate the role of cyclooxygenase-2 (COX2) and p53 gene polymorphisms in susceptibility to Chronic Obstructive Pulmonary Disease (COPD).
- To examine within-gene and gene-gene interactions of COX2 and p53 in relation to COPD risk.
Main Methods:
- A prospective gene-association study was conducted using Polymerase Chain Reaction-Restriction Fragment Length Polymorphism (PCR-RFLP) for genotyping.
- COX2 (-765G/C and 8473T/C) and p53 (72Pro/Arg) polymorphisms were analyzed in 229 COPD patients and 147 healthy controls.
Main Results:
- Specific COX2 (-765GC+CC) and p53 (Pro/Pro+Pro/Arg) genotypes showed higher prevalence in COPD patients, indicating increased odds ratios.
- The -765C and 72Pro alleles were identified as risk-alleles. A significant association was found for the COX2 -765C:8473C haplotype.
- Combinations of genotypes with multiple risk alleles (3, 4, or 5) were over-represented in patients, while combinations with fewer risk alleles were prevalent in controls.
Conclusions:
- The study concludes that the prevalence of specific COX2 and p53 risk-alleles contributes significantly to COPD susceptibility.
- Gene-gene interactions and combinations of risk alleles reinforce the association with disease risk.
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