Adapting experimental ontologies for molecular epidemiology
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Updated: Jul 2, 2026

A Data Integration Workflow to Identify Drug Combinations Targeting Synthetic Lethal Interactions
Published on: May 27, 2021
Helena F Deus1, Marta Aires de Sousa, Joao A Carrico
1University of Texas,Anderson Cancer Center, Bioinformatics and Computational Biology, Houston, TX, USA.
Abstract:
We have identified a set of indicators to track usage patterns of ontologies developed using the semantically explicit S3DB model (www.s3db.org, Nature Biotechnology (2006) 24(9):1070-1071). These indicators are quantitative measures that assess the maturity of the data model. As a case study, we have allowed experimental researchers working on molecular epidemiology to incubate a data model for molecular epidemiology by restructuring the underlying ontology and evaluating it with real data.
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