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Updated: Jul 2, 2026

Proteomic Profile of EPS-Urine through FASP Digestion and Data-Independent Analysis
Published on: May 8, 2021
Capillary electrophoresis-mass spectrometry in urinary proteome analysis: current applications and future
Jochen Metzger1, Joost P Schanstra, Harald Mischak
1Mosaiques diagnostics & therapeutics, Mellendorfer Str. 7-9, 30625, Hannover, Germany. metzger@mosaiques-diagnostics.com
Urinary proteomics using advanced platforms like capillary electrophoresis-mass spectrometry (CE-MS) offers a powerful, noninvasive approach for discovering disease biomarkers. This method aids in diagnosing and monitoring various conditions, including systemic diseases.
Area of Science:
- Proteomics
- Biomarker Discovery
- Clinical Medicine
Background:
- Noninvasive disease diagnosis and prognosis remain challenging in clinical medicine.
- Advancements in protein separation and detection enable proteome screening of biological fluids.
- Clinical studies are increasingly focused on identifying sensitive and selective disease biomarkers.
Purpose of the Study:
- To review state-of-the-art proteomic platforms utilizing urine for biomarker discovery.
- To provide an overview of clinical studies employing capillary electrophoresis-mass spectrometry (CE-MS) in urinary proteomics/peptidomics.
Main Methods:
- Focus on proteomic platforms adapted for urine sample analysis.
- Review of clinical studies using CE-MS for urinary proteomics and peptidomics.
- CE-MS enables high-throughput, one-step screening of the urinary small molecular weight proteome.
Main Results:
- CE-MS offers fast, accurate resolution of the urinary proteome.
- The technique is well-suited for large-scale proteomic studies.
- Urinary proteomics can assess systemic diseases beyond renal and urological disorders.
Conclusions:
- Urine is a valuable source for biomarker discovery, diagnosis, staging, and monitoring disease progression.
- CE-MS is a powerful tool for high-throughput urinary proteomic studies.
- Urinary proteomics holds significant potential for assessing a wide range of diseases.
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