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Updated: Jul 2, 2026

In Vitro Selection of Engineered Transcriptional Repressors for Targeted Epigenetic Silencing
Published on: May 5, 2023
TRIM28 mediates primer binding site-targeted silencing of Lys1,2 tRNA-utilizing retroviruses in embryonic cells
Daniel Wolf1, Kevin Hug, Stephen P Goff
1Howard Hughes Medical Institute, Department of Biochemistry and Molecular Biophysics, College of Physicians and Surgeons, Columbia University, New York, NY 10032, USA.
Abstract:
Murine leukemia viruses (MLVs) and related retroelements are potently restricted in embryonic cells by postintegration transcriptional silencing, likely to protect the germ line from insertional mutagenesis. This silencing is in large part attributable to the presence of a nuclear repression complex, which targets a sequence element of the proviral DNA, the repressor-binding site. The repressor-binding site closely overlaps the tRNA primer binding site, a highly conserved sequence essential for virus replication and defining the site of initiation of DNA synthesis during reverse transcription. We have recently demonstrated that the cellular corepressor TRIM28 is recruited to the proline tRNA primer-binding site used by many MLVs and is required to mediate this silencing. Here, we show that TRIM28 is also required for the restriction of retroviruses using a completely distinct tRNA for the priming of their DNA synthesis, namely Lys-1,2 tRNA. These results generalize the role of TRIM28 in retroviral restriction and suggest that this system has evolved to restrict multiple retroviruses.
Insights
Cellular corepressor TRIM28 silences retroviruses in embryonic cells. This mechanism, crucial for protecting the germline, targets distinct tRNA primer binding sites, generalizing TRIM28
Area of Science:
- Molecular Biology
- Virology
- Genetics
Background:
- Embryonic cells restrict murine leukemia viruses (MLVs) via postintegration transcriptional silencing to prevent germline insertional mutagenesis.
- This silencing is mediated by a nuclear repression complex targeting proviral DNA's repressor-binding site, which overlaps the essential tRNA primer binding site.
- The cellular corepressor TRIM28 (Tripartite Motif-Containing Protein 28) was previously shown to be recruited to the proline tRNA primer binding site for MLV silencing.
Purpose of the Study:
- To investigate the role of TRIM28 in the restriction of retroviruses that utilize a different tRNA primer.
- To generalize the understanding of TRIM28's function in retroviral restriction beyond MLVs.
Main Methods:
- Analysis of retroviral transcriptional silencing mechanisms in embryonic cells.
- Investigation of TRIM28 recruitment and function in the context of different tRNA primer binding sites.
- Experimental validation of TRIM28's requirement for restricting retroviruses utilizing Lys-1,2 tRNA.
Main Results:
- TRIM28 is demonstrated to be essential for the restriction of retroviruses employing the Lys-1,2 tRNA for DNA synthesis priming.
- This finding extends the known function of TRIM28 in mediating transcriptional silencing to a distinct class of retroviruses.
- The results indicate that the TRIM28-mediated silencing system is not limited to proline tRNA-utilizing viruses.
Conclusions:
- TRIM28 plays a generalized role in the restriction of diverse retroviruses in embryonic cells.
- The findings suggest an evolved defense mechanism utilizing TRIM28 to safeguard the germline against multiple retroviral threats.
- This study broadens the scope of TRIM28's involvement in innate antiviral immunity.
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