Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Regulation of Nuclear Protein Sorting01:45

Regulation of Nuclear Protein Sorting

Nuclear protein sorting regulates nucleus composition and gene expression, crucial for determining the fate of a eukaryotic cell. Hence, the entry and exit of molecules across the nuclear envelope is a tightly controlled process. Nuclear protein sorting can be inhibited by one of the following ways: 1) masking cargo signal sequences, 2) modifying the nuclear receptor's affinity for cargo, 3) controlling the nuclear pore size, 4) retaining the cargo during its transit to the cytosol or the...
Directionality of Nuclear Transport01:42

Directionality of Nuclear Transport

Ras-related nuclear protein or Ran is a small G protein that cycles between its GTP and GDP bound states. Ran specific regulators, a Ran GTPase Activating Protein or RanGAP present in the cytosol and a Ran guanine nucleotide exchange factor or RanGEF present inside the nucleus regulate GTP/GDP exchange. A high concentration of GTP inside the cells, in addition to this asymmetric distribution of  Ran-specific regulators, leads to a higher RanGTP concentration inside the nucleus. This...
Nuclear Protein Sorting01:34

Nuclear Protein Sorting

Nuclear protein sorting is the selective trafficking of histones, polymerases, gene regulatory proteins into the nucleus and exporting RNAs and ribosomes to the cytosol. It is a tightly controlled process that regulates gene expression within a cell.
Proteins targeted to the nucleus carry nuclear localization signals or NLS recognized by import receptors in the cytosol. Similarly, proteins with nuclear export signals are recognized by export receptors. Import and export receptors are...
Nuclear Binding Energy02:13

Nuclear Binding Energy

The difference between the calculated and experimentally measured masses is known as the mass defect of the atom. In the case of helium-4, the mass defect indicates a “loss” in mass of 4.0331 amu – 4.0026 amu = 0.0305 amu. The loss in mass accompanying the formation of an atom from protons, neutrons, and electrons is due to the conversion of that mass into energy that is evolved as the atom forms. The nuclear binding energy is the energy produced when the atoms’ nucleons are bound together;...
Nuclear Stability03:18

Nuclear Stability

Protons and neutrons, collectively called nucleons, are packed together tightly in a nucleus. With a radius of about 10−15 meters, a nucleus is quite small compared to the radius of the entire atom, which is about 10−10 meters. Nuclei are extremely dense compared to bulk matter, averaging 1.8 × 1014 grams per cubic centimeter. If the earth’s density were equal to the average nuclear density, the earth’s radius would be only about 200 meters.
To hold positively charged protons together in the...
Nuclear Export of mRNA02:31

Nuclear Export of mRNA

Before mRNAs are exported to the cytoplasm, it is crucial to check each mRNA for structural and functional integrity. Eukaryotic cells use several different mechanisms, collectively known as mRNA surveillance, to look for irregularities in mRNAs. Irregular or aberrant mRNA are rapidly degraded by various enzymes. If a defective mRNA escapes the surveillance, it would be translated into a protein which would either be non-functional or not function properly. One of the primary irregularities in...

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Dissecting the cellular architecture of breast cancer brain metastases reveals prognostically distinct immune landscapes.

Cancer cell·2026
Same author

Author Correction: Defective DNA damage repair leads to frequent catastrophic genomic events in murine and human tumors.

Nature communications·2026
Same author

DGAT1 mediates sex-specific CD8<sup>+</sup> T cell antitumour responses.

Nature metabolism·2026
Same author

Assessment of Mycobacterium tuberculosis dodecin scaffold as a multimerization platform on the immunogenicity of HPV L2 antigens.

Scientific reports·2026
Same author

A microenvironment-determined risk continuum refines subtyping in meningioma and reveals determinants of machine learning-based tumor classification.

Nature genetics·2026
Same author

Preanalytical framework for routine clinical use of liquid biopsies: combining EVs and cfDNA.

Extracellular vesicles and circulating nucleic acids·2026

Related Experiment Video

Updated: Jul 2, 2026

Mapping Absolute DNA Density in Cell Nuclei using Single-molecule Localization Microscopy
10:57

Mapping Absolute DNA Density in Cell Nuclei using Single-molecule Localization Microscopy

Published on: November 11, 2025

Macromolecular crowding and its potential impact on nuclear function.

Karsten Richter1, Michelle Nessling, Peter Lichter

  • 1Division of Molecular Genetics, Deutsches Krebsforschungszentrum, Im Neuenheimer Feld 280, 69120 Heidelberg, Germany. k.richter@dkfz.de

Biochimica Et Biophysica Acta
|August 30, 2008
PubMed
Summary
This summary is machine-generated.

Macromolecular crowding, a phenomenon where bulky molecules push others into compact forms, significantly impacts cellular processes. This effect is crucial for nuclear functions like gene transcription and DNA replication, enhancing their efficiency and statistical significance.

Related Experiment Videos

Last Updated: Jul 2, 2026

Mapping Absolute DNA Density in Cell Nuclei using Single-molecule Localization Microscopy
10:57

Mapping Absolute DNA Density in Cell Nuclei using Single-molecule Localization Microscopy

Published on: November 11, 2025

Area of Science:

  • Biochemistry
  • Cell Biology
  • Molecular Biology

Background:

  • Biochemical reactions are influenced by factors like pH, temperature, and reactant concentration.
  • Steric repulsion from bulky biological components, known as macromolecular crowding, affects molecular behavior.
  • Macromolecular crowding promotes compact organization, increases thermodynamic activity, and reduces diffusion rates.

Purpose of the Study:

  • To explore the functional significance of macromolecular crowding within the cell nucleus.
  • To investigate how crowding effects support nuclear processes involving macromolecular machines.

Main Methods:

  • Conceptual elaboration based on established principles of macromolecular crowding.
  • Analysis of the nuclear environment's composition and its implications for crowding.
  • Integration of knowledge on nuclear processes (transcription, splicing, replication) with crowding effects.

Main Results:

  • The cell nucleus, densely packed with macromolecules, is a prime environment for crowding effects.
  • Macromolecular crowding can drive the assembly of macromolecular complexes.
  • Crowding provides a cooperative momentum for nuclear activities.

Conclusions:

  • Macromolecular crowding is functionally important in the cell nucleus.
  • Crowding effects contribute to the statistical significance and efficiency of nuclear processes like gene transcription, RNA splicing, and DNA replication.