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Updated: Jul 2, 2026

Genome-wide Purification of Extrachromosomal Circular DNA from Eukaryotic Cells
Published on: April 4, 2016
Characterization of linear forms of the circular enterocin AS-48 obtained by limited proteolysis
Manuel Montalbán-López1, Barbara Spolaore, Odra Pinato
1Department of Microbiology, Faculty of Sciences, University of Granada, Av. Fuentenueva s/n, 18071 Granada, Spain.
Abstract:
AS-48 is a 70-residue circular peptide from Enterococcus faecalis with a broad antibacterial activity. Here, we produced by limited proteolysis a protein species carrying a single nicking and fragments of 55 and 38 residues. Nicked AS-48 showed a lower helicity by far-ultraviolet circular dichroism and a reduced stability to thermal denaturation, but it was active against the sensitive bacteria assayed. The fragments also partly retained the biological activity of the intact protein. These results indicate that circularization is not required for the bactericidal activity, but it is important to stabilize the native structure. Moreover, it is possible to reduce the sequence to a minimal AS-48 domain without causing inactivation of this bacteriocin.
Insights
Circularization is not essential for AS-48 bacteriocin activity, but it stabilizes its structure. Researchers found that nicked and fragmented AS-48 retained antibacterial properties, suggesting smaller domains are viable.
Area of Science:
- Microbiology
- Biochemistry
- Structural Biology
Background:
- Enterococcus faecalis produces AS-48, a circular peptide with broad-spectrum antibacterial activity.
- Understanding the structural requirements for AS-48's function is crucial for its application.
- Limited proteolysis can yield modified forms of peptides, potentially altering their properties.
Purpose of the Study:
- To investigate the role of AS-48's circular structure in its antibacterial activity and stability.
- To determine if nicked or fragmented forms of AS-48 retain biological function.
- To identify minimal structural domains responsible for AS-48's bactericidal effect.
Main Methods:
- Limited proteolysis was used to generate nicked and fragmented AS-48 variants.
- Far-ultraviolet circular dichroism measured changes in helicity.
- Thermal denaturation assessed protein stability.
- Antibacterial activity assays were performed against sensitive bacteria.
Main Results:
- Nicked AS-48 exhibited reduced helicity and thermal stability compared to the intact form.
- Despite structural changes, nicked AS-48 maintained significant antibacterial activity.
- AS-48 fragments (55 and 38 residues) also partially retained biological activity.
- These findings suggest that the circular conformation is not strictly necessary for bactericidal action.
Conclusions:
- The circular structure of AS-48 is important for stabilizing its native conformation but not essential for its antibacterial activity.
- AS-48 can be functionally truncated to smaller domains without complete loss of its bactericidal properties.
- This research opens possibilities for developing simplified AS-48 analogs with therapeutic potential.
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