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Related Concept Videos

Spermatogenesis01:41

Spermatogenesis

Spermatogenesis is the process by which haploid sperm cells are produced in the male testes. It starts with stem cells located close to the outer rim of seminiferous tubules. These spermatogonial stem cells divide asymmetrically to give rise to additional stem cells (meaning that these structures “self-renew”), as well as sperm progenitors, called spermatocytes. Importantly, this method of asymmetric mitotic division maintains a population of spermatogonial stem cells in the male reproductive...
Spreading of Chromatin Modifications02:25

Spreading of Chromatin Modifications

The histone proteins in the nucleosomes are post-translationally modified (PTM) to increase or decrease access to DNA. The commonly observed PTMs are methylation, acetylation, phosphorylation, and ubiquitination of lysine amino acids in the histone H3 tail region. These histone modifications have specific meaning for the cell. Hence, they are called "histone code". The protein complex involved in histone modification is termed as "reader-writer" complex.
Writers
The writer is an enzyme that can...
Euchromatin01:01

Euchromatin

The extent of chromatin compaction can be studied by staining chromatin using specific DNA binding dyes. Under the microscope, the dense-compacted regions take up more dye, appearing darker, while the less-compact areas take up less dye and appear lighter. Based on the compaction level, chromatins are classified into two primary forms – euchromatin and heterochromatin.
Euchromatin is the less dense region of the chromatin and stains lighter. Euchromatin contains histone H3 extensively...
Heterochromatin02:38

Heterochromatin

The extent of chromatin compaction can be studied by staining chromatin using specific DNA binding dyes. Under the microscope, the dense-compacted regions that take up more dye are called heterochromatin. Heterochromatin is further classified into two forms – constitutive heterochromatin and facultative heterochromatin.
Constitutive heterochromatin: It is a highly compact region of chromatin that is mostly concentrated in the centromere and telomere. Unlike euchromatin, the amino acid at 9th...
Covalently Linked Protein Regulators02:04

Covalently Linked Protein Regulators

Proteins can undergo many types of post-translational modifications, often in response to changes in their environment. These modifications play an important role in the function and stability of these proteins. Covalently linked molecules include functional groups, such as methyl, acetyl, and phosphate groups, and also small proteins, such as ubiquitin. There are around 200 different types of covalent regulators that have been identified.
These groups modify specific amino acids in a protein.
Chromatin Modification in iPS Cells01:32

Chromatin Modification in iPS Cells

Chromatin modification alters gene expression; therefore, scientists can add histone-modifying enzymes, histone variants, and chromatin remodeling complexes to somatic cells to aid reprogramming into pluripotent stem (iPS) cells.
Compact chromatin makes reprogramming difficult. Enzymes, such as histone demethylases and acetyltransferases, are often added during reprogramming to loosen the chromatin, making the DNA more accessible to transcription factors. Molecules that inhibit histone...

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Related Experiment Video

Updated: Jul 2, 2026

Flow Cytometric Analysis of Biomarkers for Detecting Human Sperm Functional Defects
08:48

Flow Cytometric Analysis of Biomarkers for Detecting Human Sperm Functional Defects

Published on: April 21, 2022

Increased sperm ubiquitination correlates with abnormal chromatin integrity.

M Hodjat1, M A Akhondi, S Al-Hasani

  • 1Reproductive Biotechnology Research Centre, Avicenna Research Institute, Evin, Tehran, Iran.

Reproductive Biomedicine Online
|September 4, 2008
PubMed
Summary

Sperm ubiquitination, a marker for defective sperm, strongly correlates with abnormal sperm chromatin. This finding validates ubiquitin as a key biomarker for assessing sperm quality and male fertility potential.

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Last Updated: Jul 2, 2026

Flow Cytometric Analysis of Biomarkers for Detecting Human Sperm Functional Defects
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Area of Science:

  • Reproductive Biology
  • Cellular Biology
  • Biochemistry

Background:

  • Ubiquitin tags defective spermatozoa during epididymal passage.
  • Ubiquitin is proposed as a potential biomarker for sperm quality assessment.

Purpose of the Study:

  • To evaluate the relationship between sperm ubiquitination, sperm chromatin integrity, and standard semen parameters.
  • To validate sperm ubiquitination as a biomarker for sperm quality.

Main Methods:

  • Semen samples from 63 couples were analyzed.
  • Sperm ubiquitination was assessed using direct immunofluorescence with anti-ubiquitin antibodies.
  • Sperm chromatin integrity was evaluated using acridine orange (AO) and toluidine blue (TB) tests.

Main Results:

  • A significant positive correlation was observed between ubiquitinated spermatozoa and abnormal sperm chromatin (AO: r = 0.58; TB: r = 0.48).
  • Sperm ubiquitination showed negative correlations with sperm count, morphology, and progressive motility.
  • Sperm ubiquitination was positively correlated with the percentage of immotile spermatozoa.

Conclusions:

  • Sperm chromatin abnormality is closely associated with sperm ubiquitination.
  • Sperm ubiquitination is a validated and suitable marker for assessing sperm quality and male reproductive health.