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Engineering Artificial Factors to Specifically Manipulate Alternative Splicing in Human Cells
Published on: April 26, 2017
A neoplastic gene fusion mimics trans-splicing of RNAs in normal human cells
Hui Li1, Jinglan Wang, Gil Mor
1Department of Pathology, Yale University School of Medicine, New Haven, CT 06520, USA.
Abstract:
Chromosomal rearrangements that create gene fusions are common features of human tumors. The prevailing view is that the resultant chimeric transcripts and proteins are abnormal, tumor-specific products that provide tumor cells with a growth and/or survival advantage. We show that normal endometrial stromal cells contain a specific chimeric RNA joining 5' exons of the JAZF1 gene on chromosome 7p15 to 3' exons of the Polycomb group gene JJAZ1/SUZ12 on chromosome 17q11 and that this RNA is translated into JAZF1-JJAZ1, a protein with anti-apoptotic activity. The JAZF1-JJAZ1 RNA appears to arise from physiologically regulated trans-splicing between precursor messenger RNAs for JAZF1 and JJAZ1. The chimeric RNA and protein are identical to those produced from a gene fusion found in human endometrial stromal tumors. These observations suggest that certain gene fusions may be pro-neoplastic owing to constitutive expression of chimeric gene products normally generated by trans-splicing of RNAs in developing tissues.
Insights
Normal endometrial cells produce a JAZF1-JJAZ1 fusion protein via RNA trans-splicing, which has anti-apoptotic activity. This finding suggests some gene fusions may promote cancer by constitutively expressing normally transient chimeric products.
Area of Science:
- Molecular Biology
- Oncology
- Genetics
Background:
- Gene fusions are common in human tumors, typically viewed as abnormal, tumor-specific products driving cancer growth.
- The prevailing hypothesis suggests chimeric transcripts and proteins confer a growth or survival advantage to tumor cells.
Purpose of the Study:
- To investigate the origin and function of the JAZF1-JJAZ1 chimeric RNA and protein.
- To determine if normally occurring trans-splicing events could explain gene fusions found in tumors.
Main Methods:
- Analysis of RNA transcripts in normal endometrial stromal cells.
- Identification of chimeric RNA molecules.
- Protein expression analysis and functional assays for anti-apoptotic activity.
- Comparison of tumor-derived gene fusions with naturally occurring chimeric products.
Main Results:
- Normal endometrial stromal cells express a chimeric RNA (JAZF1-JJAZ1) formed by trans-splicing of JAZF1 and JJAZ1 precursor messenger RNAs.
- This chimeric RNA is translated into a JAZF1-JJAZ1 protein exhibiting anti-apoptotic activity.
- The naturally occurring JAZF1-JJAZ1 RNA and protein are identical to those produced by gene fusions in endometrial stromal tumors.
Conclusions:
- Physiologically regulated trans-splicing can generate chimeric gene products with functional significance, such as anti-apoptotic activity.
- Constitutive expression of these normally transient chimeric products, as seen in tumors, may be a pro-neoplastic mechanism.
- This challenges the view that all tumor-associated gene fusions are solely abnormal, aberrant events.
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