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Updated: Jul 2, 2026

MicroRNA-based Regulation of Picornavirus Tropism
09:05

MicroRNA-based Regulation of Picornavirus Tropism

Published on: February 6, 2017

Cis-active RNA elements (CREs) and picornavirus RNA replication.

Benjamin P Steil1, David J Barton

  • 1Department of Microbiology and Program in Molecular Biology, University of Colorado Denver, School of Medicine, United States.

Virus Research
|September 9, 2008
PubMed
Summary

Picornavirus RNA replication relies on cis-active RNA elements (CREs) that act as templates for VPg primer synthesis. Understanding CREs and their interaction with viral proteins is key to explaining viral RNA replication.

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Confocal Imaging of Double-Stranded RNA and Pattern Recognition Receptors in Negative-Sense RNA Virus Infection

Published on: January 26, 2019

Area of Science:

  • Virology
  • Molecular Biology
  • Genetics

Background:

  • Picornavirus RNA replication mechanisms are increasingly understood.
  • Cis-active RNA elements (CREs) within viral genomes are crucial for replication.
  • CREs differ from previously identified cis-active sequences in untranslated regions.

Purpose of the Study:

  • To review the current knowledge of picornavirus CREs.
  • To explain the role of CREs in viral RNA replication.
  • To discuss the coordination of CREs with viral proteins and other cis-active RNAs.

Main Methods:

  • Literature review of picornavirus RNA replication studies.
  • Analysis of the function of CREs in VPg primer synthesis.
  • Examination of the interaction between CREs, viral proteins, and untranslated regions.

Main Results:

  • CREs serve as templates for converting Viral Protein (VPg) into VPgpUpU(OH) primers.
  • Specific adenosine residues in CRE loops facilitate the addition of uridine residues by RNA-dependent RNA polymerase 3D(Pol).
  • VPg and VPgpUpU(OH) are essential for initiating viral RNA replication.

Conclusions:

  • Understanding CREs is vital for explaining the asymmetric replication of picornavirus RNA.
  • CREs function coordinately with viral replication proteins and cis-active RNAs in the 5' and 3' NTRs.
  • Further research into CREs enhances our comprehension of picornavirus replication strategies.