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Updated: Jul 1, 2026

Prediction and Validation of Gene Regulatory Elements Activated During Retinoic Acid Induced Embryonic Stem Cell Differentiation
Published on: June 21, 2016
Modulation of expression of RA-regulated genes by the oncoprotein v-erbA
Tereza Ventura-Holman1, Abulkhair Mamoon, Jose S Subauste
1Department of Medicine, University of Mississippi Medical Center, Jackson, MS 39216, USA. tereza.holman@med.va.gov
Abstract:
Retinoic acid (RA) modulates the expression of genes involved in embryogenesis, development and differentiation processes in vertebrates. The v-erbA oncogene is known to exert a dominant-negative effect on the expression of RA-responsive genes. v-erbA belongs to a superfamily of transcription factors called nuclear receptors, which includes the retinoic acid receptors (RARs) responsible for mediating the effects of retinoic acid. While RA inhibits cell proliferation and promotes cell differentiation and apoptosis in a variety of tissues, v-erbA seems to play a role in oncogenesis, namely in the development of hepatocellular carcinoma (HCC) in a transgenic mouse model. In order to study the effect of v-erbA on RA-responsive genes, we used microarray analysis to identify genes differentially expressed in murine hepatocytes in culture (AML12 cells) stably transfected with v-erbA and exposed to RA for 3 h or 24 h. We have identified RA-responsive genes that are affected by v-erbA, as well as genes that are regulated by v-erbA alone. We have found that v-erbA can affect gene expression in the presence of RA and at the level of basal transcription. We have also identified a number of v-erbA-responsive genes that are known to be involved in carcinogenesis and which may play a role in the development of HCC.
Insights
The v-erbA oncogene interferes with retinoic acid (RA) gene regulation, impacting cell development and potentially contributing to hepatocellular carcinoma (HCC) by altering gene expression.
Area of Science:
- Molecular Biology
- Oncology
- Developmental Biology
Background:
- Retinoic acid (RA) is crucial for vertebrate development and differentiation.
- The v-erbA oncogene, a nuclear receptor, negatively impacts RA-responsive genes.
- v-erbA is implicated in oncogenesis, including hepatocellular carcinoma (HCC).
Purpose of the Study:
- To investigate how v-erbA affects RA-responsive genes.
- To identify genes regulated by v-erbA independently of RA.
- To explore v-erbA's role in HCC development.
Main Methods:
- Microarray analysis was used to compare gene expression.
- Murine hepatocytes (AML12 cells) were stably transfected with v-erbA.
- Cells were exposed to RA for 3 and 24 hours.
Main Results:
- Identified RA-responsive genes modulated by v-erbA.
- Discovered genes regulated solely by v-erbA.
- Found v-erbA affects gene expression with and without RA, including basal transcription.
- Identified v-erbA-responsive genes linked to carcinogenesis.
Conclusions:
- v-erbA significantly alters the gene expression landscape controlled by retinoic acid.
- v-erbA influences basal transcription and RA-mediated effects.
- v-erbA-regulated genes may contribute to the pathogenesis of hepatocellular carcinoma.
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09:49Quantitative Measurement of Relative Retinoic Acid Levels in E8.5 Embryos and Neurosphere Cultures Using the F9 RARE-Lacz Cell-based Reporter Assay
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