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Updated: Jul 1, 2026

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Published on: February 10, 2023
The Salmonella virulence protein SifA is a G protein antagonist
Laurie K Jackson1, Parwez Nawabi, Cristiana Hentea
1Department of Pathology, Northwestern University, Feinberg School of Medicine, Chicago, IL 60611, USA.
Abstract:
Salmonella's success at proliferating intracellularly and causing disease depends on the translocation of a major virulence protein, SifA, into the host cell. SifA recruits membranes enriched in lysosome associated membrane protein 1 (LAMP1) and is needed for growth of Salmonella induced filaments (Sifs) and the Salmonella containing vacuole (SCV). It directly binds a host protein called SKIP (SifA and kinesin interacting protein) which is critical for membrane stability and motor dynamics at the SCV. SifA also contains a WxxxE motif, predictive of G protein mimicry in bacterial effectors, but whether and how it mimics the action of a host G protein is not known. We show that SKIP's pleckstrin homology domain, which directly binds SifA, also binds to the late endosomal GTPase Rab9. Knockdown studies suggest that both SKIP and Rab9 function to maintain peripheral LAMP1 distribution in cells. The Rab9:SKIP interaction is GTP-dependent and is inhibited by SifA binding to the SKIP pleckstrin homology domain, suggesting that SifA may be a Rab9 antagonist. SifA:SKIP binding is significantly tighter than Rab9:SKIP binding and may thus allow SifA to bring SKIP to the SCV via SKIP's Rab9-binding site. Rab9 can measurably reverse SifA-dependent LAMP1 recruitment and the perinuclear location of the SCV in cells. Importantly, binding to SKIP requires SifA residues W197 and E201 of the conserved WxxxE signature sequence, leading to the speculation that bacterial G protein mimicry may result in G protein antagonism.
Insights
Salmonella virulence protein SifA antagonizes host protein Rab9 by binding to SKIP, disrupting host cell processes crucial for bacterial infection. This mimicry mechanism highlights a novel bacterial strategy for disease.
Area of Science:
- Microbiology
- Cell Biology
- Molecular Biology
Background:
- Salmonella virulence protein SifA is essential for intracellular proliferation.
- SifA interacts with host protein SKIP, influencing the Salmonella-containing vacuole (SCV) and Salmonella-induced filaments (Sifs).
- SifA possesses a conserved WxxxE motif, suggesting potential G protein mimicry.
Purpose of the Study:
- To investigate the interaction between SifA, SKIP, and the host GTPase Rab9.
- To elucidate the mechanism of SifA's function and potential G protein mimicry.
- To understand how SifA manipulates host cell processes for Salmonella survival.
Main Methods:
- Co-immunoprecipitation assays to study protein interactions.
- GTP-binding assays to assess Rab9:SKIP interaction dependency.
- Cellular knockdown studies to evaluate the roles of SKIP and Rab9.
- Microscopy to observe the localization of LAMP1 and the SCV.
Main Results:
- SifA binds to SKIP, inhibiting the interaction between SKIP and the GTPase Rab9.
- SifA binding to SKIP is stronger than Rab9:SKIP binding.
- Knockdown of SKIP or Rab9 affects lysosome associated membrane protein 1 (LAMP1) distribution.
- SifA utilizes its WxxxE motif to bind SKIP, suggesting G protein antagonism.
- Rab9 can reverse SifA-mediated effects on LAMP1 recruitment and SCV localization.
Conclusions:
- Salmonella SifA acts as an antagonist of the host GTPase Rab9 by binding to SKIP.
- Bacterial G protein mimicry, exemplified by SifA, can involve antagonism of host GTPases.
- This mechanism allows Salmonella to manipulate host cell membranes and vacuole dynamics for intracellular survival.
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