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Updated: Jun 30, 2026

Atomic Force Microscopy Investigations of DNA Lesion Recognition in Nucleotide Excision Repair
Published on: May 24, 2017
Dissection of the molecular defects caused by pathogenic mutations in the DNA repair factor XPC
Bruno M Bernardes de Jesus1, Magnar Bjørås, Frédéric Coin
1Institut de Génétique et de Biologie Moléculaire et Cellulaire, Illkirch Cedex, CU Strasbourg, France.
Abstract:
XPC is responsible for DNA damage sensing in nucleotide excision repair (NER). Mutations in XPC lead to a defect in NER and to xeroderma pigmentosum (XP-C). Here, we analyzed the biochemical properties behind mutations found within three patients: one amino acid substitution (P334H, XP1MI, and GM02096), one amino acid incorporation in a conserved domain (697insVal, XP8BE, and GM02249), and a stop mutation (R579St, XP67TMA, and GM14867). Using these mutants, we demonstrated that HR23B stabilizes XPC on DNA and protects it from degradation. XPC recruits the transcription/repair factor TFIIH and stimulates its XPB ATPase activity to initiate damaged DNA opening. In an effort to understand the severity of XP-C phenotypes, we also demonstrated that single mutations in XPC perturb other repair processes, such as base excision repair (e.g., the P334H mutation prevents the stimulation of Ogg1 glycosylase because it thwarts the interaction between XPC and Ogg1), thereby leading to a deeper understanding of the molecular repair defect of the XP-C patients.
Insights
XPC protein is crucial for DNA repair, and its mutations cause xeroderma pigmentosum (XP-C). This study reveals how specific XPC mutations disrupt DNA repair mechanisms, including base excision repair, impacting patient phenotypes.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- XPC protein initiates DNA damage sensing in nucleotide excision repair (NER).
- Mutations in XPC lead to xeroderma pigmentosum type C (XP-C), a DNA repair disorder.
- Understanding XPC mutation effects is key to XP-C pathogenesis.
Purpose of the Study:
- To investigate the biochemical impact of XPC mutations found in XP-C patients.
- To elucidate the molecular mechanisms underlying XP-C disease severity.
- To explore how XPC mutations affect other DNA repair pathways.
Main Methods:
- Analysis of biochemical properties of three distinct XPC mutants (P334H, 697insVal, R579St).
- Assessment of HR23B's role in XPC stabilization and degradation.
- Investigation of XPC's interaction with TFIIH and its effect on XPB ATPase activity.
- Evaluation of XPC mutation impact on base excision repair (e.g., Ogg1 glycosylase activity).
Main Results:
- HR23B stabilizes XPC on DNA and prevents its degradation.
- XPC recruits TFIIH and stimulates XPB ATPase activity for DNA opening.
- The P334H mutation impairs XPC interaction with Ogg1, hindering base excision repair.
- XPC mutations can disrupt multiple DNA repair pathways.
Conclusions:
- XPC mutations have diverse biochemical consequences, affecting DNA repair complex stability and function.
- XPC's role extends beyond NER, as mutations can impair base excision repair.
- These findings provide a deeper molecular understanding of XP-C patient phenotypes.
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