A polymicrobial perspective of pulmonary infections exposes an enigmatic pathogen in cystic fibrosis patients
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Updated: Jun 30, 2026

Growing a Cystic Fibrosis-Relevant Polymicrobial Biofilm to Probe Community Phenotypes
Published on: April 19, 2024
Christopher D Sibley1, Michael D Parkins, Harvey R Rabin
1Department of Microbiology and Infectious Diseases, University of Calgary, Calgary, AB, Canada T2N 4N1.
Abstract:
Lung disease is the leading cause of morbidity and mortality in cystic fibrosis (CF) patients. A modest number of bacterial pathogens have been correlated with pulmonary function decline; however, microbiological and molecular evidence suggests that CF airway infection is polymicrobial. To obtain a more complete assessment of the microbial community composition and dynamics, we undertook a longitudinal study by using culture-independent and microbiological approaches. In the process, we demonstrated that within complex and dynamic communities, the Streptococcus milleri group (SMG) can establish chronic pulmonary infections and at the onset of 39% of acute pulmonary exacerbations, SMG is the numerically dominant pathogen. We report the comprehensive polymicrobial community dynamics of a CF lung infection in a clinically relevant context. If a given organism, such as Pseudomonas aeruginosa, becomes resistant to antibiotic therapy, an alternative treatment avenue may mediate the desired clinical response by effectively managing the composition of the microbial community.
Insights
Cystic fibrosis (CF) lung infections involve complex microbial communities. The Streptococcus milleri group (SMG) is a dominant pathogen during acute exacerbations, suggesting new therapeutic targets for CF lung disease.
Area of Science:
- Microbiology
- Pulmonology
- Infectious Diseases
Background:
- Lung disease is a primary cause of morbidity and mortality in cystic fibrosis (CF) patients.
- CF airway infections are increasingly recognized as polymicrobial, involving complex microbial communities.
- Understanding these dynamics is crucial for effective CF patient management.
Purpose of the Study:
- To comprehensively assess the polymicrobial community composition and dynamics in CF lung infections.
- To investigate the role of the Streptococcus milleri group (SMG) in CF pulmonary exacerbations.
- To explore alternative therapeutic strategies targeting microbial community composition.
Main Methods:
- Longitudinal study design.
- Utilized both culture-independent and microbiological approaches.
- Analyzed microbial community composition and dynamics over time.
Main Results:
- Demonstrated complex and dynamic microbial communities within CF lungs.
- Identified the Streptococcus milleri group (SMG) as a numerically dominant pathogen during 39% of acute pulmonary exacerbations.
- Showcased SMG's ability to establish chronic pulmonary infections in CF patients.
Conclusions:
- The Streptococcus milleri group (SMG) plays a significant role in CF pulmonary exacerbations.
- Managing the overall microbial community composition offers a potential therapeutic avenue for CF lung infections.
- This research provides a comprehensive view of polymicrobial dynamics in CF lung disease.
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