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Updated: Jun 29, 2026

Purification of Hsp104, a Protein Disaggregase
Published on: September 30, 2011
Hsp104, Hsp70 and Hsp40 interplay regulates formation, growth and elimination of Sup35 prions
James Shorter1, Susan Lindquist
1Department of Biochemistry and Biophysics, University of Pennsylvania School of Medicine, Stellar-Chance Laboratories, Philadelphia, PA 19104, USA. jshorter@mail.med.upenn.edu
Abstract:
Self-templating amyloid forms of Sup35 constitute the yeast prion [PSI(+)]. How the protein-remodelling factor, Hsp104, collaborates with other chaperones to regulate [PSI(+)] inheritance remains poorly delineated. Here, we report how the Ssa and Ssb components of the Hsp70 chaperone system directly affect Sup35 prionogenesis and cooperate with Hsp104. We identify the ribosome-associated Ssb1:Zuo1:Ssz1 complex as a potent antagonist of Sup35 prionogenesis. The Hsp40 chaperones, Sis1 and Ydj1, preferentially interact with Sup35 oligomers and fibres compared with monomers, and facilitate Ssa1 and Ssb1 binding. Various Hsp70:Hsp40 pairs block prion nucleation by disassembling molten oligomers and binding mature oligomers. By binding fibres, Hsp70:Hsp40 pairs occlude prion recognition elements and inhibit seeded assembly. These inhibitory activities are partially relieved by the nucleotide exchange factor, Fes1. Low levels of Hsp104 stimulate prionogenesis and alleviate inhibition by some Hsp70:Hsp40 pairs. At high concentrations, Hsp104 eliminates Sup35 prions. This activity is reduced when Ssa1, or enhanced when Ssb1, is incorporated into nascent prions. These findings illuminate several facets of the chaperone interplay that underpins [PSI(+)] inheritance.
Insights
The Hsp70 chaperone system, including Ssb1, directly inhibits yeast prion [PSI(+)] formation by interacting with Sup35. Hsp104 cooperates with Hsp70 chaperones to regulate prion inheritance.
Area of Science:
- Molecular Biology
- Protein Folding
- Yeast Genetics
Background:
- The yeast prion [PSI(+)], formed by self-templating amyloid aggregates of the Sup35 protein, is regulated by protein remodellers like Hsp104.
- The precise roles of other chaperones, particularly the Hsp70 system, in Sup35 prionogenesis and inheritance are not fully understood.
Purpose of the Study:
- To investigate how the Hsp70 chaperone system components (Ssa and Ssb) interact with Sup35 and influence prion formation.
- To elucidate the cooperative mechanisms between Hsp70, Hsp40 chaperones, and Hsp104 in regulating yeast prion [PSI(+)] inheritance.
Main Methods:
- Investigated interactions between Sup35, Hsp70 (Ssa1, Ssb1), Hsp40 (Sis1, Ydj1), and Hsp104.
- Assessed the effects of chaperone complexes on Sup35 prion nucleation, assembly, and seeded polymerization.
- Analyzed the impact of the Ssb1:Zuo1:Ssz1 complex and nucleotide exchange factor Fes1 on prionogenesis.
Main Results:
- The Ssb1:Zuo1:Ssz1 complex acts as a potent inhibitor of Sup35 prion formation.
- Hsp40 chaperones Sis1 and Ydj1 bind Sup35 oligomers and fibers, facilitating Hsp70 binding and inhibiting prion nucleation and seeded assembly.
- Hsp70:Hsp40 pairs block prion formation by disassembling oligomers and binding fibers, with activity modulated by Fes1.
- Hsp104 at low concentrations stimulates prionogenesis, while high concentrations eliminate prions, with its activity influenced by Ssa1 and Ssb1 incorporation.
Conclusions:
- The Hsp70 chaperone system, in conjunction with Hsp40s, directly antagonizes Sup35 prion formation through multiple mechanisms.
- Hsp104 collaborates with Hsp70 chaperones, with distinct roles at different concentrations, to control yeast prion inheritance.
- These findings reveal intricate chaperone interplay critical for maintaining or eliminating the [PSI(+)] prion state.
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