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Updated: Jun 29, 2026

Mapping the Structure-Function Relationships of Disordered Oncogenic Transcription Factors Using Transcriptomic Analysis
Published on: June 27, 2020
The myxoid liposarcoma FUS-DDIT3 fusion oncoprotein deregulates NF-kappaB target genes by interaction with NFKBIZ
M Göransson1, M K Andersson, C Forni
1Lundberg Laboratory for Cancer Research (LLCR), Department of Pathology, Sahlgrenska Academy at University of Gothenburg, Gothenburg, Sweden.
Abstract:
FUS (also called TLS), EWSR1 and TAF15 (also called TAF2N) are related genes involved in tumor type-specific fusion oncogenes in human malignancies. The FUS-DDIT3 fusion oncogene results from a t(12;16)(q13;p11) chromosome translocation and has a causative role in the initiation of myxoid/round cell liposarcomas (MLS/RCLS). The FUS-DDIT3 protein induces increased expression of the CAAT/enhancer-binding protein (C/EBP) and nuclear factor-kappaB (NF-kappaB)-controlled gene IL8, and the N-terminal FUS part is required for this activation. Chromatin immunoprecipitation analysis showed that FUS-DDIT3 binds the IL8 promoter. Expression studies of the IL8 promoter harboring a C/EBP-NF-kappaB composite site pinpointed the importance of NF-kappaB for IL8 expression in FUS-DDIT3-expressing cells. We therefore probed for possible interaction of FUS-DDIT3 with members of the NF-kappaB family. The nuclear factor NFKBIZ colocalizes with FUS-DDIT3 in nuclear structures, and immunoprecipitation experiments showed that FUS-DDIT3 binds the C-terminal of NFKBIZ. We also report that additional NF-kappaB-controlled genes are upregulated at the mRNA level in FUS-DDIT3-expressing cell lines and they can be induced by NFKBIZ. Taken together, the results indicate that FUS-DDIT3 deregulates some NF-kappaB-controlled genes through interactions with NFKBIZ. Similar mechanisms may be a part of the transformation process in other tumor types carrying FUS, EWSR1 and TAF15 containing fusion oncogenes.
Insights
The FUS-DDIT3 fusion oncogene drives myxoid/round cell liposarcomas by upregulating IL8. This oncogene interacts with NFKBIZ, a nuclear factor, to deregulate NF-kappaB-controlled genes, contributing to cancer development.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- FUS, EWSR1, and TAF15 genes are implicated in tumor-specific fusion oncogenes.
- The FUS-DDIT3 fusion oncogene, arising from t(12;16), initiates myxoid/round cell liposarcomas (MLS/RCLS).
Purpose of the Study:
- To investigate the mechanism by which FUS-DDIT3 induces IL8 expression.
- To explore the interaction between FUS-DDIT3 and the nuclear factor-kappaB (NF-kappaB) pathway.
Main Methods:
- Chromatin immunoprecipitation (ChIP) to assess FUS-DDIT3 binding to the IL8 promoter.
- Expression studies analyzing the IL8 promoter activity.
- Immunoprecipitation and colocalization experiments to study protein interactions.
Main Results:
- FUS-DDIT3 binds to the IL8 promoter and activates its expression, requiring the N-terminal FUS region.
- FUS-DDIT3 interacts with the nuclear factor NFKBIZ, specifically binding its C-terminal.
- Upregulation of additional NF-kappaB-controlled genes was observed in FUS-DDIT3-expressing cells, inducible by NFKBIZ.
Conclusions:
- FUS-DDIT3 deregulates specific NF-kappaB-controlled genes via interaction with NFKBIZ.
- This mechanism contributes to the oncogenic activity of FUS-DDIT3 in MLS/RCLS.
- Similar pathways may be involved in other FUS, EWSR1, and TAF15-driven malignancies.
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