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Resampling-based empirical Bayes multiple testing procedures for controlling generalized tail probability and
Sandrine Dudoit1, Houston N Gilbert, Mark J van der Laan
1Division of Biostatistics, University of California, Berkeley, 101 Haviland Hall, #7358, Berkeley, CA 94720-7358, USA. sandrine@stat.berkeley.edu
This study introduces novel resampling-based empirical Bayes methods for controlling generalized Type I error rates in multiple testing. These procedures offer improved power and flexibility across various data distributions and dependencies.
Area of Science:
- Statistical Inference
- Multiple Hypothesis Testing
- Computational Statistics
Background:
- Existing multiple testing procedures often struggle with complex data dependencies and controlling generalized error rates.
- The false discovery rate (FDR) is a crucial metric for managing Type I errors in high-dimensional data analysis.
- There is a need for robust methods that offer Type I error control across diverse data-generating distributions.
Purpose of the Study:
- To propose novel resampling-based empirical Bayes multiple testing procedures.
- To control generalized tail probability (gTP) and generalized expected value (gEV) error rates.
- To enhance statistical power in multiple testing scenarios, particularly for FDR control.
Main Methods:
- Development of resampling-based empirical Bayes procedures for Type I error control.
- Definition of generalized tail probability (gTP) and generalized expected value (gEV) error rates.
- Incorporation of guessed sets of true null hypotheses and sampled null statistics to account for data dependence.
Main Results:
- The proposed procedures offer Type I error control for general distributions and arbitrary dependence structures.
- Empirical Bayes methods demonstrate competitive or superior power compared to established FDR procedures (Storey & Tibshirani, Benjamini & Hochberg).
- Simulation studies confirm the Type I error and power trade-off advantages of the empirical Bayes approach.
Conclusions:
- Resampling-based empirical Bayes methods provide a flexible and powerful alternative for multiple testing.
- These procedures effectively control generalized error rates and improve power across various testing scenarios.
- The approach offers a valuable enhancement to existing statistical methodologies for analyzing complex datasets.
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