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Updated: Jun 28, 2026

Assembly of Nucleosomal Arrays from Recombinant Core Histones and Nucleosome Positioning DNA
Published on: September 10, 2013
Platinum drug adduct formation in the nucleosome core alters nucleosome mobility but not positioning
1Division of Structural and Computational Biology, School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551, Singapore.
Abstract:
Nucleosome positioning and reorganization regulate DNA site exposure in chromatin. Platinum anticancer agents form DNA adducts that disrupt nuclear activities, triggering apoptosis. Mechanistic insight would aid in the development of improved therapies to circumvent drug toxicity and resistance. We show that platinum adducts formed by reaction of cisplatin or oxaliplatin with the nucleosome core inhibit histone octamer-DNA sliding but do not cause significant alteration of positioning. Thus, adduct formation reinforces positional preferences intrinsic to the DNA sequence, which indicates that modulation of platinum drug site selectivity by histone octamer association may relate to nucleosome-specific properties of DNA. This sheds light on platinum drug-mediated inhibition of chromatin remodeling in vivo and suggests that adducts can shield their own repair and interfere with genomic activities by directly altering nucleosome dynamics.
Insights
Platinum anticancer drugs form DNA adducts that alter nucleosome positioning and inhibit chromatin remodeling. This finding offers insights into drug resistance and toxicity, aiding the development of improved cancer therapies.
Area of Science:
- Molecular Biology
- Cancer Research
- Biochemistry
Background:
- Nucleosome positioning regulates DNA accessibility in chromatin.
- Platinum anticancer agents form DNA adducts, disrupting nuclear functions and inducing apoptosis.
- Understanding these mechanisms is crucial for developing better cancer treatments with reduced toxicity and resistance.
Purpose of the Study:
- To investigate the impact of platinum adducts on nucleosome positioning and dynamics.
- To elucidate the mechanistic basis for platinum drug-mediated inhibition of chromatin remodeling.
- To provide insights for improving platinum-based cancer therapies.
Main Methods:
- Studying the effects of cisplatin and oxaliplatin on nucleosome core particles.
- Analyzing histone octamer-DNA sliding and nucleosome positioning after platinum adduct formation.
Main Results:
- Platinum adducts inhibit histone octamer-DNA sliding within nucleosomes.
- Adduct formation reinforces intrinsic DNA sequence-based positioning preferences.
- Significant alterations in overall nucleosome positioning were not observed.
Conclusions:
- Platinum adducts modulate nucleosome dynamics by inhibiting sliding, reinforcing DNA sequence-dependent positioning.
- This modulation impacts chromatin remodeling in vivo and may shield adducts from repair.
- Findings suggest a link between nucleosome-specific DNA properties and platinum drug selectivity, offering avenues for therapeutic improvement.
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