Related Experiment Video
Updated: Jun 28, 2026

Microscopy of Fission Yeast Sexual Lifecycle
Published on: March 9, 2016
New interacting partners of the F-box protein Ufo1 of yeast
Keren Baranes-Bachar1, Keren Baranes-Bacher, Isam Khalaila
1Department of Life Sciences, Ben Gurion University of the Negev, Beersheba, Israel.
Abstract:
The yeast F-box protein Ufo1 recruits proteins for ubiquitylation by the SCF ubiquitin ligase complex preparing them for proteasomal degradation. Ufo1 has a role in maintenance of genome stability; its substrates include Ho endonuclease and Rad30 polymerase of error-prone DNA repair. Ufo1 is an unusual F-box protein, as it has three ubiquitin interacting motifs (UIMs). Deletion of the genomic UIMs is lethal; ectopic expression of UFO1 Delta UIMs extends protein half-life and arrests the cell cycle. A whole-genome study employing a TAP tag fused to the C-terminal UIMs did not identify Ufo1-interacting proteins. Here we therefore used stabilized N-terminally tagged Ufo1 Delta UIM as a strategy to identify Ufo1-interacting proteins by mass spectroscopy. We identified proteins that function in transcription, and an indirect interaction with Hsp70 molecular chaperones via the Skp1 adaptor; we also show that Ufo1 interacts with the 19S regulatory particle of the proteasome. Thus, our data augment the current network of known Ufo1 interacting proteins. We show directly that the UIMs are crucial for Ufo1 ubiquitylation in vivo, indicating that they facilitate turnover of SCF Ufo1 complexes. This allows recycling of the core subunits of the SCF complex and cell cycle progression.
Insights
The yeast F-box protein Ufo1, crucial for genome stability, interacts with the proteasome. Its ubiquitin interacting motifs (UIMs) are vital for ubiquitylation and cell cycle progression.
Area of Science:
- Cell Biology
- Molecular Biology
- Genetics
Background:
- The F-box protein Ufo1 in yeast is involved in genome stability and recruits substrates for ubiquitylation by the SCF ubiquitin ligase complex.
- Ufo1 possesses three ubiquitin interacting motifs (UIMs), and its deletion is lethal, while its truncated form arrests the cell cycle.
- Previous studies failed to identify Ufo1-interacting proteins using C-terminal tagging.
Purpose of the Study:
- To identify Ufo1-interacting proteins using a stabilized N-terminally tagged Ufo1 mutant lacking UIMs (Ufo1 Delta UIM).
- To elucidate the role of UIMs in Ufo1 ubiquitylation and its interaction with the proteasome.
- To expand the understanding of the Ufo1 protein network and its function in cell cycle regulation.
Main Methods:
- Utilized mass spectrometry to identify proteins interacting with N-terminally tagged Ufo1 Delta UIM.
- Employed yeast genetics and protein biochemistry techniques.
- Investigated Ufo1 ubiquitylation in vivo.
Main Results:
- Identified novel Ufo1-interacting proteins involved in transcription.
- Confirmed an indirect interaction with Hsp70 molecular chaperones via the Skp1 adaptor.
- Demonstrated a direct interaction between Ufo1 and the 19S regulatory particle of the proteasome.
- Showed that UIMs are essential for Ufo1 ubiquitylation in vivo.
Conclusions:
- The UIMs of Ufo1 are critical for its ubiquitylation, facilitating the turnover of SCF Ufo1 complexes.
- This turnover allows for the recycling of SCF complex core subunits, promoting cell cycle progression.
- The findings expand the known interactome of Ufo1 and highlight the importance of its UIMs in regulating protein stability and cell cycle.
More Related Videos
08:38Genome-wide Protein-protein Interaction Screening by Protein-fragment Complementation Assay (PCA) in Living Cells
Published on: March 3, 2015
14:34Determination of Tripartite Interaction between Two Monomers of a MADS-box Transcription Factor and a Calcium Sensor Protein by BiFC-FRET-FLIM Assay
Published on: December 25, 2021
Related Concept Videos
Protein Complexes with Interchangeable Parts
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order to...
Yeast Signaling