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Updated: Jun 28, 2026

Immunopeptidomics: Isolation of Mouse and Human MHC Class I- and II-Associated Peptides for Mass Spectrometry Analysis
Published on: October 15, 2021
Processing of an antigenic sequence from IgG constant domains for presentation by MHC class II
Morten Flobakk1, Ingunn B Rasmussen, Elin Lunde
1Department of Molecular Biosciences, University of Oslo, Oslo, Norway.
Targeting T cell epitopes to antigen-presenting cells (APCs) enhances immune responses. Researchers found specific antibody loop modifications effectively deliver epitopes to APCs, significantly boosting T cell activation in vivo.
Area of Science:
- Immunology
- Protein Engineering
- Antibody Engineering
Background:
- Targeting T cell epitopes to antigen-presenting cells (APCs) is a strategy to enhance T cell responses.
- Antibodies can be engineered to deliver specific payloads, but optimizing their structure for secretion and antigen presentation is crucial.
Purpose of the Study:
- To investigate the impact of substituting loops in human IgG constant H (C(H)) domains with T cell peptide epitopes on antibody secretion and T cell activation.
- To identify optimal locations within IgG domains for epitope insertion to maximize T cell responses.
Main Methods:
- Engineered APC-specific antibodies (anti-IgD) by substituting 18 loops in C(H)1, C(H)2, and C(H)3 domains with a T cell peptide epitope.
- Assessed secretion levels of engineered antibody-epitope fusion molecules.
- Evaluated T cell activation in vitro and in vivo (BALB/c mice) using these engineered antibodies.
Main Results:
- Antibody secretion levels followed a hierarchy: C(H)2 >= C(H)1 > C(H)3, with loop 6 (FG) showing best secretion within each domain.
- Mutants with epitopes in C(H)2 were most effective for T cell activation in vitro, particularly loop 4C(H)2.
- In vivo studies showed loop 4C(H)2 mutants induced specific T cell activation at 100-fold lower concentrations than loop 6C(H)1 mutants.
Conclusions:
- Eight specific loops (all in C(H)2, plus loop 6 in C(H)1 and C(H)3) are suitable for delivering T cell epitopes to APCs.
- The C(H)2 domain, specifically loop 4, is highly effective for enhancing T cell activation both in vitro and in vivo.
- Engineered antibodies offer a promising platform for targeted immune stimulation.
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