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DAPK-ZIPK-L13a axis constitutes a negative-feedback module regulating inflammatory gene expression
Rupak Mukhopadhyay1, Partho Sarothi Ray, Abul Arif
1Department of Cell Biology, Lerner Research Institute, Cleveland Clinic, Cleveland, OH 44195, USA.
Abstract:
Phosphorylation of ribosomal protein L13a is essential for translational repression of inflammatory genes by the interferon (IFN)-gamma-activated inhibitor of translation (GAIT) complex. Here we show that IFN-gamma activates a kinase cascade in which death-associated protein kinase-1 (DAPK) activates zipper-interacting protein kinase (ZIPK), culminating in L13a phosphorylation on Ser(77), L13a release from the ribosome, and translational silencing of GAIT element-bearing target mRNAs. Remarkably, both kinase mRNAs contain functional 3'UTR GAIT elements, and thus the same inhibitory pathway activated by the kinases is co-opted to suppress their expression. Inhibition of DAPK and ZIPK facilitates cell restoration to the basal state and allows renewed induction of GAIT target transcripts by repeated stimulation. Thus, the DAPK-ZIPK-L13a axis forms a unique regulatory module that first represses, then repermits inflammatory gene expression. We propose that the module presents an important checkpoint in the macrophage "resolution of inflammation" program, and that pathway defects may contribute to chronic inflammatory disorders.
Insights
Interferon-gamma triggers a kinase cascade that phosphorylates ribosomal protein L13a, inhibiting inflammatory gene translation. This pathway also represses the kinases themselves, forming a regulatory module for inflammation resolution.
Area of Science:
- Molecular Biology
- Immunology
- Cell Biology
Background:
- The interferon-gamma-activated inhibitor of translation (GAIT) complex represses inflammatory gene expression.
- Phosphorylation of ribosomal protein L13a is critical for GAIT complex function.
Purpose of the Study:
- To elucidate the kinase cascade regulating L13a phosphorylation and GAIT complex activity.
- To investigate the role of this pathway in controlling inflammatory gene expression and resolution.
Main Methods:
- Kinase assays to identify upstream activators of DAPK and ZIPK.
- Analysis of L13a phosphorylation and ribosomal association.
- mRNA and protein expression analysis of GAIT target genes.
Main Results:
- IFN-gamma activates DAPK, which in turn activates ZIPK, leading to L13a phosphorylation at Ser(77).
- Phosphorylated L13a is released from the ribosome, silencing translation of GAIT element-bearing mRNAs.
- The mRNAs encoding DAPK and ZIPK are also targets of this inhibitory pathway.
- Inhibition of DAPK and ZIPK allows for the re-induction of inflammatory gene expression.
Conclusions:
- The DAPK-ZIPK-L13a axis is a novel regulatory module controlling inflammatory gene expression.
- This pathway acts as a checkpoint in macrophage resolution of inflammation.
- Defects in this axis may contribute to chronic inflammatory diseases.
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