Applying a biomedical top-level ontology to encode biological taxa
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Published on: October 13, 2023
Martin Boeker1, Holger Stenzhorn, Stefan Schulz
1Institute for Medical Biometry and Medical Informatics, University Medical Center, Freiburg, Germany
Abstract:
Classifying biological entities in terms of species and taxa is an important endeavor in biology. But even though many statements within current biomedical ontologies are indeed taxon-dependent, no standard way exists to properly introduce taxon or species information into current ontological architectures. Therefore we discuss various practices to represent such information by applying a biomedical top-level ontology combined with other standard approaches like description logics or the OBO Foundry.
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