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Updated: Jun 28, 2026

Visualization of DNA Repair Proteins Interaction by Immunofluorescence
Published on: June 26, 2020
NFBD1/MDC1, 53BP1 and BRCA1 have both redundant and unique roles in the ATM pathway
Kathleen A Wilson1, David F Stern
1Department of Pathology and Graduate Program in Genetics, Yale University School of Medicine, New Haven, Connecticut 06510, USA. kathleen.a.wilson@yale.edu
Abstract:
NFBD1/MDC1, 53BP1 and BRCA1 are DNA damage checkpoint proteins with twin BRCT domains. In order to determine if they have redundant roles in responses to ionizing radiation, we used siRNA and shRNA to deplete NFBD1, 53BP1 and BRCA1 in single, double and triple combinations. These analyses were performed in early passage human foreskin fibroblasts so that checkpoint responses could be assessed in a normal genetic background. We report that NFBD1, 53BP1 and BRCA1 have both unique and redundant functions in radiation-induced phosphorylation and localization events in the ATM-Chk2 pathway. 53BP1, but not NFBD1 and BRCA1, mediates ionizing radiation-induced ATM S1981 autophosphorylation. In contrast, all three mediators collaborate to promote IR-induced Chk2 T68 phosphorylation. NFBD1 and 53BP1, but not BRCA1, work together to mediate pATMS1981, pChk2T68 and NBS1 ionizing radiation induced foci (IRIF). However, the relative importance of NFBD1 and 53BP1 in IRIF formation differ. We also determined the interdependence among mediators in IRIF recruitment. We extend previous findings in cancer cells and mouse cells that NFBD1 is upstream of 53BP1 and BRCA1 to primary human cells. Furthermore, NFBD1 promotes BRCA1 IRIF through both 53BP1-dependent and 53BP1-independent mechanisms.
Insights
Nuclear factor (NFBD1/MDC1), 53BP1, and BRCA1 proteins have overlapping roles in DNA damage response to ionizing radiation. These DNA damage checkpoint proteins exhibit both unique and redundant functions in the ATM-Chk2 pathway.
Area of Science:
- Cellular biology
- Molecular biology
- Genetics
Background:
- Nuclear factor (NFBD1/MDC1), 53BP1, and BRCA1 are key DNA damage checkpoint proteins possessing twin BRCT domains.
- Understanding their functional interplay is crucial for comprehending cellular responses to DNA damage, particularly from ionizing radiation.
Purpose of the Study:
- To investigate the potential redundant roles of NFBD1/MDC1, 53BP1, and BRCA1 in response to ionizing radiation.
- To elucidate the specific contributions of each protein and their combinations in DNA damage signaling pathways.
Main Methods:
- Utilized siRNA and shRNA to deplete NFBD1, 53BP1, and BRCA1 in single, double, and triple combinations.
- Performed analyses in early passage human foreskin fibroblasts to assess checkpoint responses in a normal genetic context.
- Examined radiation-induced phosphorylation and localization events within the ATM-Chk2 pathway.
Main Results:
- NFBD1, 53BP1, and BRCA1 demonstrate both unique and overlapping functions in the ATM-Chk2 pathway following ionizing radiation.
- 53BP1 uniquely mediates ionizing radiation-induced ATM S1981 autophosphorylation, while all three collaborate for Chk2 T68 phosphorylation.
- NFBD1 and 53BP1, but not BRCA1, cooperate in forming ionizing radiation-induced foci (IRIF) involving pATM, pChk2, and NBS1.
Conclusions:
- NFBD1 acts upstream of 53BP1 and BRCA1 in primary human cells, consistent with findings in cancer and mouse models.
- NFBD1 influences BRCA1 IRIF formation through both 53BP1-dependent and independent mechanisms.
- These findings highlight the complex interplay and functional redundancy of NFBD1, 53BP1, and BRCA1 in DNA damage response pathways.
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