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Updated: Jun 27, 2026

Quantitative Mass Spectrometric Profiling of Cancer-cell Proteomes Derived From Liquid and Solid Tumors
Published on: February 27, 2015
Dynamic proteomics of individual cancer cells in response to a drug
A A Cohen1, N Geva-Zatorsky, E Eden
1Department of Molecular Cell Biology, Weizmann Institute of Science, Rehovot 76100, Israel. ariel.cohen@weizmann.ac.il
Abstract:
Why do seemingly identical cells respond differently to a drug? To address this, we studied the dynamics and variability of the protein response of human cancer cells to a chemotherapy drug, camptothecin. We present a dynamic-proteomics approach that measures the levels and locations of nearly 1000 different endogenously tagged proteins in individual living cells at high temporal resolution. All cells show rapid translocation of proteins specific to the drug mechanism, including the drug target (topoisomerase-1), and slower, wide-ranging temporal waves of protein degradation and accumulation. However, the cells differ in the behavior of a subset of proteins. We identify proteins whose dynamics differ widely between cells, in a way that corresponds to the outcomes-cell death or survival. This opens the way to understanding molecular responses to drugs in individual cells.
Insights
Individual cancer cells exhibit distinct protein dynamics when treated with chemotherapy. These protein variations correlate with cell survival or death, offering insights into drug response variability.
Area of Science:
- Cell biology
- Proteomics
- Pharmacology
Background:
- Cancer cells can exhibit variable responses to chemotherapy drugs.
- Understanding the molecular basis of this variability is crucial for effective cancer treatment.
Purpose of the Study:
- To investigate the dynamic protein responses in individual human cancer cells treated with camptothecin.
- To identify protein dynamics that correlate with differential cell fates (survival vs. death).
Main Methods:
- Developed a dynamic-proteomics approach to track nearly 1000 endogenously tagged proteins in single living cells.
- Utilized high temporal resolution to capture protein level and localization changes.
- Analyzed protein dynamics in response to camptothecin chemotherapy.
Main Results:
- Observed rapid translocation of drug-specific proteins, including the target topoisomerase-1.
- Detected slower, widespread waves of protein degradation and accumulation across cells.
- Identified a subset of proteins with highly variable dynamics between individual cells.
- Correlated specific protein dynamic patterns with outcomes of cell death or survival.
Conclusions:
- Cellular responses to chemotherapy are characterized by dynamic and variable protein behavior.
- Individual protein dynamics can predict cell fate following drug exposure.
- This study provides a framework for understanding single-cell drug responses and identifying potential therapeutic targets.
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