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Updated: Jun 27, 2026

Tick Microbiome Characterization by Next-Generation 16S rRNA Amplicon Sequencing

Tick Microbiome Characterization by Next-Generation 16S rRNA Amplicon Sequencing

Published on: August 25, 2018

VectorBase: a data resource for invertebrate vector genomics.

Daniel Lawson¹, Peter Arensburger, Peter Atkinson

¹European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SD, UK. lawson@ebi.ac.uk

Nucleic Acids Research

|November 26, 2008

Summary

This summary is machine-generated.

VectorBase provides curated genomic data for invertebrate disease vectors, enhancing research accessibility. This bioinformatics resource now includes community annotation and gene expression data for key species.

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Area of Science:

Bioinformatics
Genomics
Invertebrate Biology

Background:

VectorBase is a NIAID-funded Bioinformatics Resource Center.
Focuses on invertebrate vectors of human pathogens.
Provides annotated and curated vector genomes for researchers.

Purpose of the Study:

To present updates on the VectorBase resource.
To highlight new features and expanded data.
To emphasize its role as an integrated research tool.

Main Methods:

Genome annotation and curation.
Development of a community annotation system.
Integration of microarray and gene expression data.
Creation of controlled vocabularies for anatomy and insecticide resistance.
Software infrastructure and data interrogation tool development.

Main Results:

VectorBase now includes genome information for Aedes aegypti, Anopheles gambiae, Culex quinquefasciatus, Pediculus humanus, and Ixodes scapularis.
New features include a community annotation system, a microarray and gene expression repository, and controlled vocabularies.
Ongoing development of software infrastructure and data interrogation tools.

Conclusions:

VectorBase serves as a vital, integrated resource for studying invertebrate vectors.
The addition of new features enhances data accessibility and research capabilities.
Continued development ensures VectorBase remains a cutting-edge bioinformatics platform.