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Published on: December 31, 2014
Metastases suppressor NM23-H2 interaction with G-quadruplex DNA within c-MYC promoter nuclease hypersensitive element
Ram Krishna Thakur1, Praveen Kumar, Kangkan Halder
1Proteomics and Structural Biology Unit, Institute of Genomics and Integrative Biology, CSIR, Delhi, India.
Abstract:
Regulatory influence of the G-quadruplex or G4 motif present within the nuclease hypersensitive element (NHE) in the promoter of c-MYC has been noted. On the other hand, association of NM23-H2 to the NHE leads to c-MYC activation. Therefore, NM23-H2 interaction with the G4 motif within the c-MYC NHE presents an interesting mechanistic possibility. Herein, using luciferase reporter assay and chromatin immunoprecipitation we show NM23-H2 mediated c-MYC activation involves NM23-H2-G4 motif binding within the c-MYC NHE. G4 motif complex formation with recombinant NM23-H2 was independently confirmed using fluorescence energy transfer, which also indicated that the G4 motif was resolved to an unfolded state within the protein-bound complex. Taken together, this supports transcriptional role of NM23-H2 via a G4 motif.
Insights
NM23-H2 protein directly binds to the G-quadruplex (G4) motif in the c-MYC gene promoter. This interaction is crucial for activating c-MYC gene expression, revealing a novel transcriptional mechanism.
Area of Science:
- Molecular Biology
- Gene Regulation
- Biochemistry
Background:
- The c-MYC gene promoter contains a nuclease hypersensitive element (NHE) with a G-quadruplex (G4) motif, known to influence gene regulation.
- The protein NM23-H2 has been associated with the activation of c-MYC.
Purpose of the Study:
- To investigate the mechanistic link between NM23-H2 and the G4 motif within the c-MYC NHE.
- To determine if NM23-H2 directly interacts with the G4 motif and if this binding is responsible for c-MYC activation.
Main Methods:
- Luciferase reporter assays were employed to assess c-MYC promoter activity.
- Chromatin immunoprecipitation (ChIP) was used to detect NM23-H2 binding to the c-MYC NHE.
- Fluorescence energy transfer (FRET) assays were utilized to confirm direct binding between NM23-H2 and the G4 motif.
Main Results:
- NM23-H2 mediated c-MYC activation was shown to involve direct binding to the G4 motif within the c-MYC NHE.
- ChIP assays confirmed the association of NM23-H2 with the c-MYC NHE.
- FRET analysis confirmed complex formation between recombinant NM23-H2 and the G4 motif, demonstrating G4 motif resolution upon binding.
Conclusions:
- NM23-H2 directly binds to the G4 motif in the c-MYC NHE, leading to c-MYC transcriptional activation.
- This study elucidates a novel mechanism for transcriptional regulation involving direct protein-G4 motif interaction.
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