Structural and functional diversity of bacterial membrane fusion proteins
Helen I Zgurskaya1, Yoichi Yamada, Elena B Tikhonova
1University of Oklahoma Department of Chemistry and Biochemistry 620 Parrington Oval, Room 208 Norman, OK 73019, USA. elenaz@ou.edu
Abstract:
Membrane Fusion Proteins (MFPs) are functional subunits of multi-component transporters that perform diverse physiological functions in both Gram-positive and Gram-negative bacteria. MFPs associate with transporters belonging to Resistance-Nodulation-cell Division (RND), ATP-Binding Cassette (ABC) and Major Facilitator (MF) superfamilies of proteins. Recent studies suggested that MFPs interact with substrates and play an active role in transport reactions. In addition, the MFP-dependent transporters from Gram-negative bacteria recruit the outer membrane channels to expel various substrates across the outer membrane into external medium. This review is focused on the diversity, structure and molecular mechanism of MFPs that function in multidrug efflux. Using phylogenetic approaches we analyzed diversity and representation of multidrug MFPs in sequenced bacterial genomes. In addition to previously characterized MFPs from Gram-negative bacteria, we identified MFPs that associate with RND-, MF- and ABC-type transporters in Gram-positive bacteria. Sequence analyses showed that MFPs vary significantly in size (200-650 amino acid residues) with some of them lacking the signature alpha-helical domain of multidrug MFPs. Furthermore, many transport operons contain two- or three genes encoding distinct MFPs. We further discuss the diversity of MFPs in the context of current views on the mechanism and structure of MFP-dependent transporters.
Insights
Membrane fusion proteins (MFPs) are crucial for bacterial transport systems. This review explores MFP diversity, structure, and mechanisms, revealing their roles in multidrug efflux across bacterial types.
Area of Science:
- Microbiology
- Molecular Biology
- Biochemistry
Background:
- Membrane fusion proteins (MFPs) are vital components of bacterial multi-component transporters.
- They are associated with Resistance-Nodulation-cell Division (RND), ATP-Binding Cassette (ABC), and Major Facilitator (MF) superfamilies.
- MFPs are increasingly recognized for their active role in substrate interaction and transport reactions.
Purpose of the Study:
- To review the diversity, structure, and molecular mechanisms of MFPs involved in multidrug efflux.
- To analyze the representation of multidrug MFPs in bacterial genomes using phylogenetic approaches.
- To identify and characterize MFPs in Gram-positive bacteria.
Main Methods:
- Phylogenetic analysis of sequenced bacterial genomes.
- Sequence analysis of identified MFPs.
- Review of current literature on MFP structure and function.
Main Results:
- Identified MFPs associated with RND-, MF-, and ABC-type transporters in Gram-positive bacteria, expanding known MFP diversity.
- MFPs exhibit significant size variation (200-650 amino acids) and some lack the characteristic alpha-helical domain.
- Many bacterial transport operons encode multiple distinct MFPs.
Conclusions:
- MFPs display considerable diversity in Gram-positive bacteria, challenging previous classifications.
- Understanding MFP diversity is key to elucidating the structure and mechanism of MFP-dependent transporters.
- This review provides a comprehensive overview of MFPs in multidrug efflux systems.
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