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Updated: Jun 27, 2026

Design and Synthesis of a Reconfigurable DNA Accordion Rack
Published on: August 15, 2018
Entropy driven key-lock assembly
G Odriozola1, F Jiménez-Angeles, M Lozada-Cassou
1Programa de Ingenieria Molecular, Instituto Mexicano del Petroleo, Lazaro Cardenas 152, CP 07730 Mexico, D.F., Mexico.
Abstract:
The effective interaction between a sphere with an open cavity (lock) and a spherical macroparticle (key), both immersed in a hard sphere fluid, is studied by means of Monte Carlo simulations. As a result, a two-dimensional map of the key-lock effective interaction potential is constructed, which leads to the proposal of a self-assembling mechanism: There exists trajectories through which the key-lock pair could assemble avoiding trespassing potential barriers. Hence, solely the entropic contribution can induce their self-assembling even in the absence of attractive forces. This study points out the solvent contribution within the underlying mechanisms of substrate-protein assemblydisassembly processes, which are important steps of the enzyme catalysis and protein mediated transport.
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