A conserved domain in the leader proteinase of foot-and-mouth disease virus is required for proper subcellular

Teresa de los Santos1, Fayna Diaz-San Segundo, James Zhu

  • 1Plum Island Animal Disease Center, U.S. Department of Agriculture, Greenport, New York 11944, USA. teresa.delossantos@ars.usda.gov

Journal of Virology
|December 5, 2008
PubMed

Insights

Mutating the SAP domain of foot-and-mouth disease virus leader proteinase (L(pro)) attenuates viral replication. This mutation prevents L(pro) from degrading the NF-kappaB p65/RelA subunit, preserving innate immune responses.

Area of Science:

  • Virology
  • Immunology
  • Molecular Biology

Background:

  • Foot-and-mouth disease virus (FMDV) leader proteinase (L(pro)) antagonizes innate immunity by inhibiting interferon (IFN) production.
  • L(pro) blocks host mRNA translation and degrades the NF-kappaB p65/RelA subunit.

Purpose of the Study:

  • To investigate the role of the SAP domain within FMDV L(pro) in viral pathogenesis.
  • To determine if mutations in the SAP domain affect L(pro)'s interaction with NF-kappaB and innate immune signaling.

Main Methods:

  • Site-directed mutagenesis was used to create single and double mutants within the L(pro) SAP domain.
  • Mutant viruses were analyzed for replication efficiency, L(pro) subcellular localization, p65/RelA degradation, and NF-kappaB transcriptional activity.

Main Results:

  • A double mutant virus exhibited an attenuated phenotype in cell culture.
  • The double mutant L(pro) showed altered subcellular distribution and failed to degrade p65/RelA.
  • NF-kappaB-dependent transcription remained active in cells infected with the double mutant virus, unlike WT FMDV infection.
  • Degradation of the translation factor eIF-4G was unaffected by the SAP domain mutations.

Conclusions:

  • Mutation of the FMDV L(pro) SAP domain separates its functions, specifically preventing p65/RelA degradation while maintaining translational shutoff.
  • This finding highlights a novel mechanism by which FMDV L(pro) modulates the host immune response and suggests potential therapeutic targets.

Related Concept Videos

Leaky Scanning02:28

Leaky Scanning

During most eukaryotic translation processes, the small 40S ribosome subunit scans an mRNA from its 5' end until it encounters the first start AUG codon. The large 60S ribosomal subunit then joins the smaller one to initiate protein synthesis. The location of the translation initiation is largely determined by the nucleotides near the start codon as there may be multiple translation initiation sites present on the mRNA.  Marilyn Kozak discovered that the sequence RCCAUGG (where R stands for...
Conservation of Protein Domains Over Different Proteins02:26

Conservation of Protein Domains Over Different Proteins

Protein domains are small structurally independent units that are part of a single amino acid chain.  Although these domains are often structurally independent, they may rely on synergistic effects to perform their functions as part of a larger protein. Protein domains may be conserved within the same organism, as well as across different organisms.
A limited set of protein domains often duplicate and recombine during evolution. These domains can be organized in different combinations to form...
Conserved Binding Sites01:49

Conserved Binding Sites

Many proteins’ biological role depends on their interactions with their ligands, small molecules that bind to specific locations on the protein known as ligand-binding sites. Ligand-binding sites are often conserved among homologous proteins as these sites are critical for protein function.
Binding sites are often located in large pockets, and if their location on a protein’s surface is unknown, it can be predicted using various approaches. The energetic method computationally analyses the...
Directing Proteins to the Rough Endoplasmic Reticulum01:34

Directing Proteins to the Rough Endoplasmic Reticulum

The organelle-specific signaling sequences direct proteins synthesized in the cytosol to their final destination like ER, mitochondria, peroxisomes, etc. Some of the proteins directed to ER are then trafficked via vesicles to other organelles within the cell or the extracellular environment through the Golgi complex. For example, the rough ER synthesizes soluble proteins for transportation to the lysosomes or secretion out of the cell. It can also synthesize transmembrane proteins that can...
Protein Translocation Machinery on the ER Membrane01:28

Protein Translocation Machinery on the ER Membrane

The translocon complex situated on the ER membrane is the main gateway for the protein secretory pathway. It facilitates the transport of nascent peptides into the ER lumen and their insertion into the ER membrane.
Sec61 protein conducting channel
In eukaryotes, the translocon complex comprises a core heterotrimeric translocator channel called the Sec61 complex. This channel includes three transmembrane proteins, Sec61α, Sec61β, and Sec61γ, and is the largest subunit of the translocon complex.