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Published on: December 12, 2017
Structure and function of colicin S4, a colicin with a duplicated receptor-binding domain
Thomas Arnold1, Kornelius Zeth, Dirk Linke
1Department I, Protein Evolution, Max Planck Institute for Developmental Biology, Spemannstrasse 35, 72076 Tübingen, Germany.
Abstract:
Colicins are plasmid-encoded toxic proteins produced by Escherichia coli strains to kill other E. coli strains that lack the corresponding immunity protein. Colicins intrude into the host cell by exploiting existing transport, diffusion, or efflux systems. We have traced the way colicin S4 takes to execute its function and show that it interacts specifically with OmpW, OmpF, and the Tol system before it inserts its pore-forming domain into the cytoplasmic membrane. The common structural architecture of colicins comprises a translocation, a receptor-binding, and an activity domain. We have solved the crystal structure of colicin S4 to a resolution of 2.5 A, which shows a remarkably compact domain arrangement of four independent domains, including a unique domain duplication of the receptor-binding domain. Finally, we have determined the residues responsible for binding to the receptor OmpW by mutating exposed charged residues in one or both receptor-binding domains.
Insights
Colicin S4 uses specific outer membrane proteins (OmpW, OmpF) and the Tol system to enter E. coli. Its crystal structure reveals a unique duplicated receptor-binding domain essential for OmpW interaction.
Area of Science:
- Bacteriology
- Structural Biology
- Molecular Biology
Background:
- Colicins are bacteriocins produced by Escherichia coli, acting as toxic proteins to inhibit competing strains.
- These proteins utilize host cell machinery for entry, including transport, diffusion, and efflux systems.
- The general structure of colicins involves translocation, receptor-binding, and activity domains.
Purpose of the Study:
- To elucidate the entry pathway and structural characteristics of colicin S4.
- To determine the specific host cell receptors and systems involved in colicin S4 translocation.
- To identify the structural basis for colicin S4's interaction with its primary receptor, OmpW.
Main Methods:
- Tracking the functional pathway of colicin S4 within the host cell.
- Solving the crystal structure of colicin S4 at 2.5 A resolution.
- Site-directed mutagenesis of potential receptor-binding residues in colicin S4.
Main Results:
- Colicin S4 specifically interacts with OmpW, OmpF, and the Tol system for cellular entry.
- The crystal structure of colicin S4 displays a compact arrangement of four domains, featuring a duplicated receptor-binding domain.
- Mutational analysis identified key residues in the receptor-binding domains responsible for OmpW binding.
Conclusions:
- Colicin S4 employs a multi-step entry mechanism involving outer membrane proteins and the Tol system.
- The unique duplicated receptor-binding domain is crucial for colicin S4's specific recognition of OmpW.
- Understanding colicin S4's structure-function relationship provides insights into bacteriocin-host interactions.
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