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Multiplexed Isothermal Amplification Based Diagnostic Platform to Detect Zika, Chikungunya, and Dengue 1
Published on: March 13, 2018
Clinical and virological characterization of imported cases of Chikungunya fever
Martin Pfeffer1, Gudrun Zöller, Sandra Essbauer
1Bundeswehr Institute of Microbiology, Munich, Germany. martin1pfeffer@bundeswehr.org
Abstract:
A Chikungunya virus (CHIKV) epidemic emerged in the Indian Ocean islands of the Comores, Reunion, Mayotte, Mauritius, the Seychelles and Madagascar in 2005 resulting in the infection of about 250.000 inhabitants and travellers in only one year. Beginning in March 2006 increasing numbers of CHIKV-like febrile illnesses were reported from various parts of India. We investigated 70 consecutive German travellers returning from the affected areas and presenting with arthralgia and/or fever suggestive of CHIKV infection. Eleven patients had serological evidence of CHIKV infection. Real-time RT-PCR for CHIKV was positive in two cases, one who returned from Mauritius and the other who came back from Rajasthan, Northern India. In both cases CHIKV was isolated and sequencing of the entire viral genome was performed. The nucleotide sequence data obtained for both CHIKV strains revealed a high level of identity to CHIKV isolates from the ongoing epidemic. In detail, we found only 18 nucleotide exchanges between the isolates from Mauritius and Rajasthan, resulting in only six amino acid changes (nsP1 T128K, T376M, nsP3 S472N, capsid P23S, V27I and E1-protein A226V). Although the excessive dimension of the 2005/2006 outbreak in the Indian Ocean islands was at least in part accounted to the naïve population affected, our results of the Rajasthan isolate support that the emergence of this CHIKV subtype may rather be a result of a better viral fitness. This has been previously accounted to a A226V change in the E1 protein of the new CHIKV variant when compared to other CHIKV data available. This mutation, supposedly resulting in high-titred viremia in humans and/or an enhanced adaptation to the vector population resulting in increased transmission rates, was also found in our CHIKV isolate from Mauritius. The spread of an African CHIKV to Asia further demonstrates how fast viruses can emerge and establish in places where competent vectors are prevalent.
Insights
Chikungunya virus (CHIKV) spread rapidly in 2005-2006. Genetic analysis of CHIKV from travelers revealed a highly fit strain in India, suggesting enhanced viral adaptation and transmission potential.
Area of Science:
- Virology
- Epidemiology
- Genetics
Background:
- The 2005-2006 Chikungunya virus (CHIKV) epidemic in Indian Ocean islands infected approximately 250,000 people.
- CHIKV-like illnesses were reported in India starting March 2006.
Purpose of the Study:
- To investigate CHIKV infection in German travelers returning from affected regions.
- To genetically characterize CHIKV isolates from returned travelers.
Main Methods:
- Serological testing for CHIKV infection.
- Real-time RT-PCR for CHIKV detection.
- Viral isolation and whole-genome sequencing of CHIKV strains.
Main Results:
- Eleven of 70 travelers showed serological evidence of CHIKV infection.
- CHIKV was detected by RT-PCR in two travelers, one from Mauritius and one from Rajasthan, India.
- Sequencing revealed high genetic similarity between the Mauritius and Rajasthan isolates, with only 18 nucleotide and six amino acid differences.
- A key mutation (A226V in the E1 protein) associated with increased viral fitness and transmission was present in both isolates.
Conclusions:
- The emergence of the CHIKV subtype in India may be attributed to enhanced viral fitness, potentially driven by the A226V mutation.
- This mutation may enhance viremia in humans and/or adaptation to vectors, leading to increased transmission.
- The rapid spread of CHIKV from Africa to Asia highlights the potential for swift emergence and establishment of viruses in areas with competent vectors.
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