Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Protein Kinases and Phosphatases02:54

Protein Kinases and Phosphatases

Proteins undergo chemical modifications that trigger changes in the charge, structure, and conformation of the proteins. Phosphorylation, acetylation, glycosylation, nitrosylation, ubiquitination, lipidation, methylation, and proteolysis are various protein modifications that regulate protein activity. Such modifications are usually enzyme-driven.
Protein kinases
Many proteins in the cell are regulated by phosphorylation, the addition of a phosphate group. A family of enzymes called kinases...
Protein Kinases and Phosphatases02:54

Protein Kinases and Phosphatases

Proteins undergo chemical modifications that trigger changes in the charge, structure, and conformation of the proteins. Phosphorylation, acetylation, glycosylation, nitrosylation, ubiquitination, lipidation, methylation, and proteolysis are various protein modifications that regulate protein activity. Such modifications are usually enzyme-driven.
Protein kinases
Many proteins in the cell are regulated by phosphorylation, the addition of a phosphate group. A family of enzymes called kinases...
Enzymes02:34

Enzymes

Inside living organisms, enzymes act as catalysts for many biochemical reactions involved in cellular metabolism. The role of enzymes is to reduce the activation energies of biochemical reactions by forming complexes with its substrates. The lowering of activation energies favor an increase in the rates of biochemical reactions.
Enzyme deficiencies can often translate into life-threatening diseases. For example, a genetic abnormality resulting in the deficiency of the enzyme G6PD...
Introduction to Mechanisms of Enzyme Catalysis01:13

Introduction to Mechanisms of Enzyme Catalysis

For many years, scientists thought that enzyme-substrate binding took place in a simple "lock-and-key" fashion. This model stated that the enzyme and substrate fit together perfectly in one instantaneous step. However, current research supports a more refined view scientists call induced fit. The induced-fit model expands upon the lock-and-key model by describing a more dynamic interaction between enzyme and substrate. As the enzyme and substrate come together, their interaction causes a mild...
Introduction to Mechanisms of Enzyme Catalysis01:13

Introduction to Mechanisms of Enzyme Catalysis

For many years, scientists thought that enzyme-substrate binding took place in a simple "lock-and-key" fashion. This model stated that the enzyme and substrate fit together perfectly in one instantaneous step. However, current research supports a more refined view scientists call induced fit. The induced-fit model expands upon the lock-and-key model by describing a more dynamic interaction between enzyme and substrate. As the enzyme and substrate come together, their interaction causes a mild...
Ribozymes02:47

Ribozymes

The term ribozyme is used for RNA that can act as an enzyme. Ribozymes are mainly found in selected viruses, bacteria, plant organelles, and lower eukaryotes. Ribozymes were first discovered in 1982 when Tom Cech’s laboratory observed Group I introns acting as enzymes. This was shortly followed by the discovery of another ribozyme, Ribonulcease P, by Sid Altman’s laboratory. Both Cech and Altman received the Nobel Prize in chemistry in 1989 for their work on ribozymes.
Ribozymes can be...

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Ancestral Protein Reconstruction Uncovers a Thermotolerant Rieske Oxygenase with Enhanced <i>O</i>-Demethylation Activity toward 3-<i>O</i>-Methylgallate.

ACS synthetic biology·2026
Same author

Discovering novel multi-target compounds against aspartyl viral polymerases via ligand-based pharmacophore and structure-based screening.

Scientific reports·2026
Same author

A methionine-lined active site governs carbocation stabilization and product specificity in a bacterial terpene synthase.

FEBS letters·2026
Same author

Deep-Learning-Guided Mining and Clustering of Remote Amino Acid Residues for the Simultaneous Engineering of the Catalytic Activity and Thermostability of a Processive Endoglucanase.

ACS synthetic biology·2025
Same author

Influence of Different Amino Acids on the Aerosolization, Stability and Cytotoxicity of Spray-Dried Cannabidiol Dry Powder for Inhalation.

Pharmaceutics·2025
Same author

Assessing the Impact of Wildfire Emissions on the Seasonal Cycle of CO and Emergency Room Visits in Alberta and Ontario, Canada.

GeoHealth·2025

Related Experiment Video

Updated: Jun 27, 2026

X-Ray Crystallography to Study the Oligomeric State Transition of the Thermotoga maritima M42 Aminopeptidase TmPep1050
11:27

X-Ray Crystallography to Study the Oligomeric State Transition of the Thermotoga maritima M42 Aminopeptidase TmPep1050

Published on: May 13, 2020

A structural and catalytic model for zinc phosphoesterases.

Rebecca R Buchholz1, Morgan E Etienne, Anneke Dorgelo

  • 1School of Molecular and Microbial Sciences, The University of Queensland, Queensland, Australia 4072.

Dalton Transactions (Cambridge, England : 2003)
|December 17, 2008
PubMed
Summary

This study synthesized a structural model for phosphoesterases, crucial enzymes for degrading neurotoxins. The zinc complex demonstrated catalytic activity in breaking down organophosphate neurotoxins.

More Related Videos

Modeling Ligands into Maps Derived from Electron Cryomicroscopy
09:30

Modeling Ligands into Maps Derived from Electron Cryomicroscopy

Published on: July 19, 2024

Modeling an Enzyme Active Site using Molecular Visualization Freeware
14:37

Modeling an Enzyme Active Site using Molecular Visualization Freeware

Published on: December 25, 2021

Related Experiment Videos

Last Updated: Jun 27, 2026

X-Ray Crystallography to Study the Oligomeric State Transition of the Thermotoga maritima M42 Aminopeptidase TmPep1050
11:27

X-Ray Crystallography to Study the Oligomeric State Transition of the Thermotoga maritima M42 Aminopeptidase TmPep1050

Published on: May 13, 2020

Modeling Ligands into Maps Derived from Electron Cryomicroscopy
09:30

Modeling Ligands into Maps Derived from Electron Cryomicroscopy

Published on: July 19, 2024

Modeling an Enzyme Active Site using Molecular Visualization Freeware
14:37

Modeling an Enzyme Active Site using Molecular Visualization Freeware

Published on: December 25, 2021

Area of Science:

  • Coordination Chemistry
  • Bioinorganic Chemistry
  • Enzyme Mimicry

Background:

  • Phosphoesterases are vital enzymes that hydrolyze organophosphate compounds, including dangerous neurotoxins.
  • Developing artificial models of enzyme active sites can provide insights into their mechanisms and lead to new catalysts.

Purpose of the Study:

  • To synthesize and characterize a structural model of a phosphoesterase active site using zinc(II) complexes.
  • To investigate the catalytic activity of the synthesized zinc complex in the hydrolysis of organophosphate substrates.

Main Methods:

  • Synthesis and characterization of a novel ligand (H(3)L1) and its zinc(II) complexes.
  • Structural elucidation using X-ray crystallography.
  • Functional studies involving kinetic analysis of substrate hydrolysis (bis(4-nitrophenyl)phosphate).

Main Results:

  • A tetrameric structure of dinuclear zinc complexes bridged by phosphate and acetate ligands was revealed by X-ray crystallography.
  • The zinc complex with HL1(2-) ligand was found to be a competent catalyst for the hydrolysis of bis(4-nitrophenyl)phosphate.
  • A catalytic rate constant (kcat) of 1.26 ± 0.06 x 10^-6 s^-1 was determined for the hydrolysis reaction.

Conclusions:

  • The synthesized zinc complex serves as a functional structural model for phosphoesterase active sites.
  • This model demonstrates the potential for designing artificial enzymes for the degradation of organophosphate neurotoxins.
  • The study provides a foundation for further development of efficient catalytic systems for detoxification.