Related Experiment Video
Updated: Jun 27, 2026

Phage Phenomics: Physiological Approaches to Characterize Novel Viral Proteins
Published on: June 11, 2015
In silico identification of genes in bacteriophage DNA
Andrew M Kropinski1, Mark Borodovsky, Tim J Carver
1Public Health Agency of Canada, Laboratory for Foodborne Diseases, Guelph, Ontario, Canada.
Abstract:
One of the most satisfying aspects of a genome sequencing project is the identification of the genes contained within it.These are of two types: those which encode tRNAs and those which produce proteins. After a general introduction on the properties of protein-encoding genes and the utility of the Basic Local Alignment Search Tool (BLASTX) to identify genes through homologs, a variety of tools are discussed by their creators. These include for genome annotation: GeneMark, Artemis, and BASys; and, for genome comparisons: Artemis Comparison Tool (ACT), Mauve, CoreGenes, and GeneOrder.
Related Concept Videos
DNA Bacteriophages
Bacteriophages of the Human Virome
Lytic Cycle of Bacteriophages
CRISPR and crRNAs
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
Lysogenic Cycle of Bacteriophages
Viral Replication: Lytic Cycle

