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Updated: Jun 27, 2026

Three-Dimensional Shape Modeling and Analysis of Brain Structures
Published on: November 14, 2019
Age and gender based biomechanical shape and size analysis of the pediatric brain
Kerry A Danelson1, Carol P Geer, Joel D Stitzel
1Wake Forest University School of Medicine. kdanelso@wfubmc.edu
Insights
Pediatric brain shape and size changes influence injury prediction models. Brain size variations significantly impact finite element model responses more than shape changes, aiding in better injury assessment for children in car crashes.
Area of Science:
- Biomechanical Engineering
- Pediatric Traumatology
- Neuroscience
Background:
- Motor vehicle crashes (MVCs) are a primary cause of pediatric head injury and mortality in the US.
- Understanding pediatric brain morphologic changes is crucial for injury prediction and finite element model (FEM) development.
- Existing models may not fully capture age-related variations in brain structure.
Purpose of the Study:
- To quantify age-related shape and size (morphologic) changes in the pediatric brain (cerebrum, cerebellum, brainstem, ventricles).
- To assess how these morphologic changes affect the response of a pediatric head injury finite element model (FEM).
- To develop a model describing pediatric brain morphologic changes as a function of age.
Main Methods:
- Generalized Procrustes Analysis (GPA) with a sliding landmark method on MRI data from 63 normal subjects.
- Regression analysis of shape and size changes against age to create an age-based morphologic model.
- Application of affine transformations to the SIMon FEM using size and shape models to analyze injury response variations.
Main Results:
- The cerebrum exhibited the most significant shape changes with age (p<0.009 for both sexes).
- The age-based model explained over 80% of the variation in cerebrum size.
- FEM responses, particularly the spatial distribution of elements exceeding 15% strain, varied with size and shape transformations, but overall response magnitude was driven by size variations.
Conclusions:
- A novel methodology was established to quantify pediatric brain shape and size variation from infancy to adulthood.
- FEM responses to simulated injury are more sensitive to age-related brain size changes than shape changes.
- This research provides a foundation for more accurate pediatric head injury prediction and improved biomechanical modeling.
Abstract:
Injuries caused by motor vehicle crashes (MVCs) are the leading cause of head injury and death for children in the United States. This study aims to describe the shape and size (morphologic) changes of the cerebrum, cerebellum, brainstem, and ventricles of the pediatric occupant to better predict injury and assess how these changes affect finite element model (FEM) response. To quantify morphologic differences in the brain, a Generalized Procrustes Analysis (GPA) with a sliding landmark method was conducted to isolate morphologic changes using magnetic resonance images of 63 normal subjects. This type of geometric morphometric analysis was selected for its ability to identify homologous landmarks on structures with few true landmarks and isolate the shape and size of the individuals studied. From the resulting landmark coordinates, the shape and size changes were regressed against age to develop a model describing morphologic changes in the pediatric brain as a function of age. The most statistically significant shape change was in the cerebrum with p-values of 0.00346 for males and 0.00829 for females. The age-based model explains over 80% of the variation in size in the cerebrum. Using size and shape models, affine transformations were applied to the SIMon FEM to determine differences in response given differences in size and size plus shape. The geometric centroid of the elements exceeding 15% strain was calculated and compared to the geometric centroid of the entire structure. Given the same Haversine pulse, the centroid location, a metric for the spatial distribution of the elements exceeding an injury threshold, varied based on which transformation was applied to the model. To assess the overall response of the model, three injury metrics were examined to determine the magnitude of the metrics each element sustained and the overall volume of elements that experienced that value. These results suggested that the overall response of the model was driven by the variation in size, with little variation due to changes in shape. This study demonstrates a new methodology to quantify the shape and size variation of the brain from infancy to adulthood. The use of the changes in shape and size when applied to a FEM suggests that there are differences in the spatial distribution of the elements that exceed a specific threshold based on shape but the overall volume of elements experiencing the specified magnitude was more dependent on the changes in the size of the model with little change due to shape.
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