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Related Concept Videos

Brain Imaging01:14

Brain Imaging

Brain imaging technologies provide critical insights into both the structure and function of the human brain, enabling medical professionals and researchers to diagnose, study, and treat neurological disorders or psychiatric disorders more effectively.
These technologies include computerized axial tomography (CAT or CT scans), positron-emission tomography (PET scans),  magnetic resonance imaging (MRI),  functional magnetic resonance imaging (fMRI), and Transcranial Magnetic Stimulation (TMS).

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Related Experiment Video

Updated: Jun 26, 2026

Whole-brain Segmentation and Change-point Analysis of Anatomical Brain MRI—Application in Premanifest Huntington's Disease
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BrainMaps.org - Interactive High-Resolution Digital Brain Atlases and Virtual Microscopy.

Shawn Mikula1, James M Stone, Edward G Jones

  • 1Center for Neuroscience, 1544 Newton Court, University of California, Davis, CA, 95618, USA.

Brains, Minds & Media : Journal of New Media in Neural and Cognitive Science and Education
|January 9, 2009
PubMed
Summary

BrainMaps.org offers an interactive digital brain atlas with millions of high-resolution images for exploring brain structure and function. This resource facilitates neuroanatomical research and teaching across multiple species.

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Area of Science:

  • Neuroscience
  • Bioinformatics
  • Digital Imaging

Background:

  • Neuroanatomical data is crucial for understanding brain structure and function.
  • Sharing and accessing large-scale neuroanatomical datasets is often challenging.
  • Digital tools can enhance the visualization and analysis of brain tissues.

Purpose of the Study:

  • To introduce BrainMaps.org, an interactive digital brain atlas and virtual microscope.
  • To provide online access to high-resolution scanned images of primate and non-primate brains.
  • To facilitate data querying and retrieval for neuroanatomical research and education.

Main Methods:

  • Utilized over 20 million megapixels of scanned serial brain sections.
  • Integrated a high-speed database for efficient data querying.
  • Developed web-based tools for interactive visualization and analysis.

Main Results:

  • BrainMaps.org provides online access to complete brain datasets for multiple species, including Homo sapiens and Mus musculus.
  • The platform enables visualization of digitized brain sections at a sub-neuronal level.
  • Facilitated large-scale connectional tracing, histochemical, and stereological analyses.

Conclusions:

  • BrainMaps.org enhances accessibility and sharing of neuroanatomical data.
  • The developed tools are valuable for both neuroscience research and teaching.
  • This resource supports advanced analyses of brain structure and function.