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Published on: October 11, 2018
Clustering of disease-causing mutations on the domain-domain interfaces of ABCC6
Krisztina Fülöp1, László Barna, Orsolya Symmons
1Institute of Enzymology, Hungarian Academy of Sciences, Karolina ut 29, Budapest, Hungary.
Abstract:
Mutations in ABCC6 are responsible for pseudoxanthoma elasticum (PXE), a rare genetic disease affecting the elastic tissues of the body. ABCC6 encodes a 1503 amino acid long ABC transporter, ABCC6/MRP6. The functional link between the impaired activity of the protein and the disease is not known. We have built a homology model of this transporter, and analyzed the distribution of the known 119 missense PXE-associated mutations within the predicted structure. Significant clustering of the missense mutations has been found at complex domain-domain interfaces: at the transmission interface that involves four intracellular loops and the two ABC domains as well as at the ABC-ABC interacting surfaces. The mutations affecting these regions are 2.75 and 3.53-fold more frequent than the average mutational rate along the transporter protein sequence. These data provide a genetic proof of the importance of these domain-domain interactions in the ABCC6 transporter.
Insights
Mutations causing pseudoxanthoma elasticum (PXE) cluster in specific areas of the ABCC6 transporter protein. This finding highlights the critical role of domain interactions in ABCC6 transporter function and PXE disease.
Area of Science:
- Biochemistry
- Genetics
- Structural Biology
Background:
- Pseudoxanthoma elasticum (PXE) is a rare genetic disorder affecting elastic tissues.
- Mutations in the ABCC6 gene are the known cause of PXE.
- The functional consequences of ABCC6 mutations remain unclear.
Purpose of the Study:
- To investigate the structural impact of PXE-associated mutations in the ABCC6 transporter.
- To identify regions critical for ABCC6 transporter function through mutation analysis.
Main Methods:
- Homology modeling was used to create a 3D structure of the ABCC6 transporter.
- 119 known missense PXE-associated mutations were mapped onto the homology model.
- Mutation distribution was analyzed to identify significant clustering.
Main Results:
- Missense mutations in ABCC6 show significant clustering at domain-domain interfaces.
- Specific interfaces include the transmission interface and ABC-ABC interacting surfaces.
- Mutations in these critical regions are significantly more frequent than expected.
Conclusions:
- The study provides genetic evidence for the importance of domain-domain interactions in ABCC6 transporter function.
- These interactions are crucial for ABCC6 transporter activity and likely play a role in PXE pathogenesis.
- Targeting these interfaces may offer therapeutic insights for PXE.
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