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Related Concept Videos

X-ray Crystallography02:18

X-ray Crystallography

The size of the unit cell and the arrangement of atoms in a crystal may be determined from measurements of the diffraction of X-rays by the crystal, termed X-ray crystallography.
Diffraction
Diffraction is the change in the direction of travel experienced by an electromagnetic wave when it encounters a physical barrier whose dimensions are comparable to those of the wavelength of the light. X-rays are electromagnetic radiation with wavelengths about as long as the distance between neighboring...
X-ray Diffraction of Biological Samples01:10

X-ray Diffraction of Biological Samples

X-ray diffraction or XRD is an analytical tool that utilizes X-rays to study ordered structures such as crystalline organic and inorganic samples, polycrystalline materials, proteins, carbohydrates, and drugs.
According to Bragg's law, when X-rays strike the sample positioned on a stage, the rays are  scattered by the electron clouds around the sample atoms. The  X-ray diffraction or scattering is caused by constructive interference of the X-ray waves that reflect off the internal crystal...
Crystal Growth: Principles of Crystallization01:25

Crystal Growth: Principles of Crystallization

Crystallization is a phase transformation process in which crystals are precipitated from a supersaturated solution or formed from other sources. During crystallization, atoms or molecules arrange themselves into a well-defined, rigid crystal lattice to minimize energy.
Initiating crystallization involves manipulating the concentration of the solute and the temperature of the solution. Since crystal growth occurs when the ratio of concentration and solubility of the solute in the solvent – the...
Polymer Classification: Crystallinity01:21

Polymer Classification: Crystallinity

Unlike ionic or small covalent molecules, polymers do not form crystalline solids due to the diffusion limitations of their long-chain structures. However, polymers contain microscopic crystalline domains separated by amorphous domains.
Crystalline domains are the regions where polymer chains are aligned in an orderly manner and held together in proximity by intermolecular forces. For example, chains in the crystalline domains of polyethylene and nylon are bound together by van der Waals...
Gene Families01:57

Gene Families

Gene families consist of groups of genes proposed to have originated from a common ancestor. Typically these arise through events in which a gene or genes are mistakenly duplicated during cell division. Unlike their parent genes (which are subject to selection pressure to maintain function), these gene copies do not need to preserve their sequences and may evolve at a relatively faster rate.
Occasionally these regions can be adapted to take on new roles within the organism, becoming novel genes...
Crystal Field Theory - Tetrahedral and Square Planar Complexes02:46

Crystal Field Theory - Tetrahedral and Square Planar Complexes

Tetrahedral Complexes
Crystal field theory (CFT) is applicable to molecules in geometries other than octahedral. In octahedral complexes, the lobes of the dx2−y2 and dz2 orbitals point directly at the ligands. For tetrahedral complexes, the d orbitals remain in place, but with only four ligands located between the axes. None of the orbitals points directly at the tetrahedral ligands. However, the dx2−y2 and dz2 orbitals (along the Cartesian axes) overlap with the ligands less than the dxy,...

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Related Experiment Video

Updated: Jun 26, 2026

Fully Autonomous Characterization and Data Collection from Crystals of Biological Macromolecules
07:11

Fully Autonomous Characterization and Data Collection from Crystals of Biological Macromolecules

Published on: March 22, 2019

The Biomolecular Crystallization Database Version 4: expanded content and new features.

Michael Tung1, D Travis Gallagher

  • 1Center for Advanced Research in Biotechnology/National Institute of Standards and Technology, 9600 Gudelsky Drive, Rockville, Maryland 20850, USA.

Acta Crystallographica. Section D, Biological Crystallography
|January 21, 2009
PubMed
Summary
This summary is machine-generated.

The Biological Macromolecular Crystallization Database (BMCD) now offers enhanced search capabilities and expanded data, including macromolecule sequences. This updated resource aids researchers in analyzing protein crystallization for scientific discovery.

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Crystallization and In Situ Room Temperature Data Collection Using the Crystallization Facility at Harwell and Beamline VMXi, Diamond Light Source
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Crystallization and In Situ Room Temperature Data Collection Using the Crystallization Facility at Harwell and Beamline VMXi, Diamond Light Source

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Derivatization of Protein Crystals with I3C using Random Microseed Matrix Screening
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Derivatization of Protein Crystals with I3C using Random Microseed Matrix Screening

Published on: January 16, 2021

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Last Updated: Jun 26, 2026

Fully Autonomous Characterization and Data Collection from Crystals of Biological Macromolecules
07:11

Fully Autonomous Characterization and Data Collection from Crystals of Biological Macromolecules

Published on: March 22, 2019

Crystallization and In Situ Room Temperature Data Collection Using the Crystallization Facility at Harwell and Beamline VMXi, Diamond Light Source
07:08

Crystallization and In Situ Room Temperature Data Collection Using the Crystallization Facility at Harwell and Beamline VMXi, Diamond Light Source

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Derivatization of Protein Crystals with I3C using Random Microseed Matrix Screening
14:04

Derivatization of Protein Crystals with I3C using Random Microseed Matrix Screening

Published on: January 16, 2021

Area of Science:

  • Biophysics
  • Structural Biology
  • Biochemistry

Background:

  • The Biological Macromolecular Crystallization Database (BMCD) has served as a vital resource for crystallographic data since 1988.
  • It archives information on crystal growth for proteins and other biological macromolecules.

Purpose of the Study:

  • To update and enhance the BMCD with expanded content and improved search functionalities.
  • To facilitate more elaborate analysis of factors influencing biological macromolecular crystallization.

Main Methods:

  • Expanded the BMCD content to include 14,372 crystal entries and macromolecule sequences.
  • Integrated Java-based Lucene query language for detailed parameter searching, including numeric ranges.
  • Developed tools for importing and handling data from the RCSB Protein Data Bank.

Main Results:

  • The updated database, BMCD version 4.02 (BMCD4), now includes comprehensive macromolecule sequence data.
  • Enhanced search capabilities allow for detailed analysis of relationships between protein properties, crystallization conditions, and crystal characteristics.
  • The resource remains freely accessible online.

Conclusions:

  • The enhanced BMCD4 provides a powerful, updated platform for researchers.
  • Improved data and search functionalities will accelerate the design of crystal-growth strategies and scientific analysis.