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Published on: April 4, 2018
Coding variant I62V in the complement factor H gene is strongly associated with polypoidal choroidal vasculopathy
Naoshi Kondo1, Shigeru Honda, Shin-ichi Kuno
1Department of Surgery, Division of Ophthalmology, Kobe University Graduate School of Medicine, Kobe, Japan.
Insights
Genetic variants in the complement factor H (CFH) gene are strongly associated with polypoidal choroidal vasculopathy (PCV). The I62V variant in CFH appears to be a key factor in PCV development.
Area of Science:
- Ophthalmology
- Genetics
- Immunology
Background:
- Polypoidal choroidal vasculopathy (PCV) is a common subtype of age-related macular degeneration.
- The complement system, particularly complement factor H (CFH), is implicated in the pathogenesis of various ocular diseases.
Purpose of the Study:
- To investigate the association between variants in the complement factor H (CFH) gene and the risk of developing polypoidal choroidal vasculopathy (PCV).
Main Methods:
- A case-control study was conducted with 130 PCV patients and 173 unrelated controls from a Japanese population.
- Genotyping of 12 tag single nucleotide polymorphisms (SNPs) in the CFH gene, including rs800292 (I62V) and rs1061170 (Y402H), was performed using TaqMan technology.
- Association analyses of allele and haplotype frequencies were conducted.
Main Results:
- A significant association between the CFH gene region and PCV was observed.
- The strongest association was found at the rs800292 (I62V) variant (P = 1.7 x 10(-7)).
- Conditional analyses indicated that the I62V variant fully accounts for the observed association signals across the examined CFH SNPs due to linkage disequilibrium.
Conclusions:
- The complement pathway plays a significant role in the pathogenesis of PCV.
- The nonsynonymous CFH variant I62V is a strong candidate for a causal polymorphism contributing to PCV development.
Purpose:
To investigate whether variants in the complement factor H (CFH) gene are associated with polypoidal choroidal vasculopathy (PCV).
Design:
Cross-sectional study.
Participants:
A case-control group of 130 PCV subjects and 173 unrelated controls.
Methods:
We conducted an association analysis between CFH variants and PCV in a Japanese population, genotyping 12 tag single nucleotide polymorphisms (SNPs)-including rs3753394, rs800292 (I62V), and rs1061170 (Y402H)-that are highly representative of the common genetic variation in the CFH region. Genotyping was performed using TaqMan technology.
Main Outcome Measures:
Allele and haplotype frequencies of the CFH variants.
Results:
A highly significant association with PCV was observed across the CFH region. The strongest association was observed at I62V (P = 1.7 x 10(-7)). Six other SNPs (rs3753394, rs6680396, rs1410996, rs2284664, rs1329428, and rs1065489) also showed significant association (10(-3) < P < 10(-6)). These associations became nonsignificant after accounting for rs800292 in a conditional logistic regression analysis. A significant omnibus haplotype association was detected in the entire CFH region (omnibus P = 1.6 x 10(-5) at 7 degrees of freedom). Conditional haplotype-based likelihood ratio tests revealed that the significant omnibus haplotype association disappeared when it was estimated conditional on I62V (omnibus P = 0.20, 6 degrees of freedom, post-I62V dependency), whereas the omnibus haplotype association remained significant when it was estimated conditional on any SNP other than I62V. These findings indicate that multiple observed effects were caused by linkage disequilibrium with I62V, and that this variant fully accounts for the association signals observed at the set of SNPs examined at this locus.
Conclusions:
The present study provides evidence that the complement pathway plays a substantial role in the pathogenesis of PCV. The nonsynonymous variant I62V is a plausible candidate for a causal polymorphism leading to the development of PCV, given its potential for functional consequences on the CFH protein and our own statistical evidence.
Financial Disclosure(S):
The authors have to proprietary or commercial interest in any materials discussed in this article.
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