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Updated: Jun 26, 2026

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease
Published on: April 4, 2018
Coding variant I62V in the complement factor H gene is strongly associated with polypoidal choroidal vasculopathy.
Naoshi Kondo1, Shigeru Honda, Shin-ichi Kuno
1Department of Surgery, Division of Ophthalmology, Kobe University Graduate School of Medicine, Kobe, Japan.
Genetic variants in the complement factor H (CFH) gene are strongly associated with polypoidal choroidal vasculopathy (PCV). The I62V variant in CFH appears to be a key factor in PCV development.
Area of Science:
- Ophthalmology
- Genetics
- Immunology
Background:
- Polypoidal choroidal vasculopathy (PCV) is a common subtype of age-related macular degeneration.
- The complement system, particularly complement factor H (CFH), is implicated in the pathogenesis of various ocular diseases.
Purpose of the Study:
- To investigate the association between variants in the complement factor H (CFH) gene and the risk of developing polypoidal choroidal vasculopathy (PCV).
Main Methods:
- A case-control study was conducted with 130 PCV patients and 173 unrelated controls from a Japanese population.
- Genotyping of 12 tag single nucleotide polymorphisms (SNPs) in the CFH gene, including rs800292 (I62V) and rs1061170 (Y402H), was performed using TaqMan technology.
- Association analyses of allele and haplotype frequencies were conducted.
Main Results:
- A significant association between the CFH gene region and PCV was observed.
- The strongest association was found at the rs800292 (I62V) variant (P = 1.7 x 10(-7)).
- Conditional analyses indicated that the I62V variant fully accounts for the observed association signals across the examined CFH SNPs due to linkage disequilibrium.
Conclusions:
- The complement pathway plays a significant role in the pathogenesis of PCV.
- The nonsynonymous CFH variant I62V is a strong candidate for a causal polymorphism contributing to PCV development.
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