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Published on: October 31, 2014
mRNA interferases, sequence-specific endoribonucleases from the toxin-antitoxin systems
Yoshihiro Yamaguchi1, Masayori Inouye
1Department of Biochemistry, Robert Wood Johnson Medical School, Piscataway, NJ 08854, USA.
Abstract:
Escherichia coli contains a large number of suicide or toxin genes, whose expression leads to cell growth arrest and eventual cell death. One such toxin, MazF, is an ACA-specific endoribonuclease, termed "mRNA interferase."E. coli contains other mRNA interferases with different sequence specificities, which are considered to play important roles in growth regulation under stress conditions, and also in eliminating stress-damaged cells from a population. Recently, MazF homologues with 5-base recognition sequences have been identified, for example, those from Mycobacterium tuberculosis. These sequences are significantly underrepresented in the genes for protein families playing a role in the immunity and pathogenesis of M. tuberculosis. An mRNA interferase in Myxococcus xanthus is essential for programmed cell death during fruiting body formation. We propose that mRNA interferases play roles not only in cell growth regulation and programmed cell death, but also in regulation of specific gene expression (either positively or negatively) in bacteria.
Insights
Bacterial mRNA interferases, like E. coli MazF, are toxins that regulate cell growth and death. These enzymes cleave specific mRNA sequences, influencing gene expression and programmed cell death in bacteria.
Area of Science:
- Bacteriology
- Molecular Biology
- Genetics
Background:
- Bacteria possess numerous toxin genes, including mRNA interferases, which regulate cell growth and death.
- MazF from Escherichia coli is an ACA-specific endoribonuclease, known as an mRNA interferase.
- Other bacterial mRNA interferases with distinct sequence specificities are implicated in stress response and elimination of damaged cells.
Purpose of the Study:
- To explore the diverse roles of mRNA interferases in bacterial physiology.
- To investigate the significance of mRNA interferase homologues in different bacterial species.
- To propose a broader function for mRNA interferases in bacterial gene expression regulation.
Main Methods:
- Comparative analysis of mRNA interferase sequences and their recognition sites across different bacterial species.
- Review of existing literature on the function of mRNA interferases in growth regulation, programmed cell death, and stress response.
- Bioinformatic analysis of gene representation in relation to mRNA interferase recognition sequences.
Main Results:
- MazF homologues with 5-base recognition sequences have been identified in bacteria like Mycobacterium tuberculosis.
- These specific recognition sequences are underrepresented in genes related to immunity and pathogenesis in M. tuberculosis.
- An mRNA interferase in Myxococcus xanthus is crucial for programmed cell death during development.
Conclusions:
- mRNA interferases contribute to bacterial growth regulation and programmed cell death.
- These enzymes may also play a role in the positive or negative regulation of specific gene expression in bacteria.
- The findings suggest a multifaceted role for mRNA interferases in bacterial survival and adaptation.
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