Altered early infant gut microbiota in children developing allergy up to 5 years of age

Y M Sjögren1, M C Jenmalm, M F Böttcher

  • 1Department of Immunology, The Wenner Gren Institute, Arrhenius Laboratory of Natural Sciences F5, Stockholm University, Stockholm, Sweden. ylva.sjogren@imun.su.se

Insights

Early infant gut microbiota diversity, including specific bifidobacteria and lactobacilli, is linked to reduced allergy development. Larger families and higher endotoxin exposure correlate with more diverse infant gut bacteria.

Area of Science:

  • Microbiome research
  • Pediatric allergy
  • Immunology

Background:

  • Early infant gut colonization by bifidobacteria and lactobacilli is thought to protect against allergies.
  • Conversely, Clostridium difficile colonization may be linked to allergic disease.
  • Previous studies often used culture-dependent methods and had limited follow-up periods.

Purpose of the Study:

  • To investigate the relationship between specific species of bifidobacteria and lactobacilli in early infancy and allergy development up to age 5.
  • To explore the influence of environmental factors like family size and allergen exposure on infant gut microbiota composition.

Main Methods:

  • Prospective study of 47 Swedish infants with fecal sample analysis at 1 week, 1 month, and 2 months post-birth.
  • Real-time PCR used to quantify bacterial DNA, including Clostridium difficile, specific Bifidobacterium and Lactobacillus species, and Bacteroides fragilis.
  • Allergy defined by symptoms and positive skin prick tests within the first 5 years; environmental factors included family size and endotoxin/Fel d 1 levels in dust.

Main Results:

  • Infants who developed allergies were less frequently colonized with Lactobacillus group I, Bifidobacterium adolescentis, and Clostridium difficile in the first two months.
  • Infants with a higher diversity of Bifidobacterium species were associated with greater endotoxin exposure and larger family sizes.

Conclusions:

  • A more diverse infant gut microbiota in early life may play a protective role against allergy development.
  • This diversity may be influenced by environmental factors such as family size and endotoxin exposure, supporting an inverse relationship with allergy.
Abstract

Related Concept Videos

Development of Human Microbiota01:30

Development of Human Microbiota

The human microbiota begins developing at birth and undergoes continual change as we age. Infancy marks a critical period of microbial sensitivity, offering a “window of opportunity” during which beneficial microbes help mature the immune system. By age three, children typically develop a more stable and diverse microbial community. Newborns acquire microbes from their immediate environment; vaginal delivery favors maternal vaginal microbes, while cesarean births favor microbes from the skin...
Microbiota Modulation by Antibiotics01:21

Microbiota Modulation by Antibiotics

Antibiotics have revolutionized modern medicine by saving countless lives from bacterial infections. However, their widespread use has inadvertently harmed the delicate balance of the human gut microbiota. The gut microbiota, a complex community of bacteria, archaea, viruses, and fungi, plays a vital role in regulating metabolism, immune responses, and maintaining intestinal health. Antibiotics, especially broad-spectrum types, disrupt this ecosystem by eradicating both harmful and beneficial...
Anatomy of the Intestines01:23

Anatomy of the Intestines

Although digestion of proteins, carbohydrates, and lipids may begin in the stomach, it is completed in the intestine. The absorption of nutrients, water, and electrolytes from food and drink also occurs in the intestine. The intestines can be divided into two structurally distinct organs—the small and large intestines.
Small Intestines
The small intestine is an ~7 meter-long tube with an inner diameter of just 2.5 cm. Since most nutrients are absorbed here, the inner lining of the small...
Development of the Oral Microbiota01:28

Development of the Oral Microbiota

The establishment of the oral microbiome begins before birth, challenging the long-held belief that the fetal oral cavity is sterile. The presence of oral microbes such as Streptococcus and Fusobacterium in amniotic fluid suggests that microbial exposure may occur in utero, potentially through translocation from the maternal oral or gastrointestinal tract. This early colonization primes the neonatal immune system and sets the stage for subsequent microbial succession. Maternal health,...
Gut-Brain Axis01:22

Gut-Brain Axis

The gut–brain axis is a bidirectional communication system that connects the gastrointestinal tract and the brain. This interaction is mediated through multiple pathways, including the vagus nerve, hormonal signals, immune responses, and chemical messengers produced by gut microbes.Microbial Contributions to Brain FunctionGut microbiota contributes significantly to brain function by producing neuroactive compounds. These include neuroactive compounds that influence neurotransmitters such as...
Dysbiosis of the Gut Microbiota01:18

Dysbiosis of the Gut Microbiota

The human gut microbiome includes a diverse array of microbial species, including beneficial commensals and opportunistic pathogens, which interact to support host health. These microbes contribute to essential functions such as nutrient metabolism, immune system modulation, and maintenance of intestinal barrier integrity. However, disruptions to this equilibrium—referred to as dysbiosis—can have widespread physiological consequences.Dysbiosis is often characterized by reduced microbial...