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Updated: Jun 25, 2026

Collection and Extraction of Occupational Air Samples for Analysis of Fungal DNA
Published on: May 2, 2018
[Occupational exposure to mesophilic microorganisms associated with commercial processing of compost for mushroom
Alina Buczyńska1, Małgorzata Sowiak, Irena Szadkowska-Stańczyk
1Instytut Medycyny Pracy im. prof. J. Nofera, Lódź, Zakład Srodowiskowych Zagrozeń Zdrowia. alina@imp.lodz.pl
Background:
The aim of the study was to assess the occupational exposure to mesophilic microorganisms associated with commercial processing of compost for mushroom production.
Materials And Methods:
The air samples for microbiological analysis were collected directly on Petri dishes with Malt Extract Agar medium using Burkard Air Sampler. The quantitative and qualitative identification of mesophilic bacteria and mesophilic fungi were performed using the standard microbiological procedures.
Results:
Considerable variation in exposure to bioaerosols within the sectors of compost production were observed. The highest level of mesophilic bacteria in the air (4.17 x 10(4) cfu/m3) was measured during the mixing of raw materials with water and loading of the final compost piles to the pasteurization tunnels (3.54 x 10(4) cfu/m3). The highest concentration of mesophilic fungi was found in the air samples collected during the manual unrolling of straw (1.62 x 10(4) cfu/m3) and dosing of mycelium to the compost (1.15 x 10(4) cfu/m3). Among 33 identified bacteria and fungi species, Pasteurella sp, Proteus mirabilis, Streptomyces sp, Corynebacterium sp and Aspergillusfumigatus create the potential risk for health of exposed workers.
Conclusions:
The presence of microorganisms found in the air creats the potential risk for human health, therefore the use of personal equipment, protecting the respiratory tract and skin of exposed workers is strongly recommended.
Insights
Occupational exposure to mesophilic microorganisms during mushroom compost production poses health risks. Workers handling compost face significant bioaerosol exposure, necessitating protective measures.
Area of Science:
- Environmental microbiology
- Occupational health and safety
Background:
- Commercial compost processing for mushroom production involves potential exposure to microorganisms.
- Assessing occupational exposure levels is crucial for worker safety in this industry.
Purpose of the Study:
- To evaluate occupational exposure to mesophilic microorganisms during commercial mushroom compost production.
Main Methods:
- Air samples were collected using a Burkard Air Sampler on Malt Extract Agar medium.
- Standard microbiological procedures were used for quantitative and qualitative identification of mesophilic bacteria and fungi.
Main Results:
- Significant variations in bioaerosol exposure were observed across different compost production stages.
- Highest mesophilic bacteria levels (4.17 x 10^4 cfu/m3) occurred during raw material mixing and pasteurization loading.
- Elevated mesophilic fungi concentrations (1.62 x 10^4 cfu/m3) were detected during manual straw unrolling and mycelium dosing.
Conclusions:
- Identified microorganisms, including Aspergillus fumigatus, present potential health risks to exposed workers.
- Use of personal protective equipment for respiratory and skin protection is strongly recommended.
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