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Updated: Jun 25, 2026

Next Generation Sequencing for the Detection of Actionable Mutations in Solid and Liquid Tumors
Published on: September 20, 2016
Functional differences between two classes of oncogenic mutation in the PIK3CA gene
Claire Chaussade1, Kitty Cho, Claire Mawson
1Department of Molecular Medicine, University of Auckland, New Zealand.
Abstract:
PIK3CA codes for the p110alpha isoform of class-IA PI 3-kinase and oncogenic mutations in the helical domain and kinase domain are common in several cancers. We studied the biochemical properties of a common helical domain mutant (E545K) and a common kinase domain mutant (H1047R). Both retain the ability to autophosphorylate Ser608 of p85alpha and are also inhibited by a range of PI 3-kinase inhibitors (Wortmannin, LY294002, PI-103 and PIK-75) to a similar extent as WT p110alpha. Both mutants display an increased V(max) but while a PDGF derived diphosphotyrosylpeptide caused an increase in V(max) for WT p85alpha/p110alpha it did not for the E545K variant and actually decreased V(max) for the H1047R variant. Further, the E545K mutant was activated by H-Ras whereas the H1047R mutant was not. Together these results suggest helical domain mutants are in a state mimicking activation by growth factors whereas kinase domain mutants mimic the state activated by H-Ras.
Insights
Oncogenic PIK3CA mutations in cancer were studied. Helical domain mutants mimic growth factor activation, while kinase domain mutants mimic H-Ras activation.
Area of Science:
- Biochemistry
- Molecular Biology
- Cancer Research
Background:
- PIK3CA gene mutations are common in various cancers.
- These mutations occur in the helical and kinase domains of the p110alpha isoform of class-IA PI 3-kinase.
- Understanding mutant biochemical properties is crucial for targeted cancer therapies.
Purpose of the Study:
- To investigate the biochemical properties of common PIK3CA helical domain (E545K) and kinase domain (H1047R) mutants.
- To compare the activation mechanisms of these mutants with wild-type (WT) p110alpha.
- To assess the differential responses of mutants to growth factor and H-Ras signaling.
Main Methods:
- Biochemical characterization of WT p110alpha, E545K, and H1047R mutants.
- Enzyme kinetics assays measuring V(max) and inhibition by PI 3-kinase inhibitors (Wortmannin, LY294002, PI-103, PIK-75).
- Assessment of mutant activation by platelet-derived growth factor (PDGF) and H-Ras.
Main Results:
- Both E545K and H1047R mutants showed increased V(max) and similar inhibition by PI 3-kinase inhibitors as WT p110alpha.
- PDGF increased V(max) for WT p110alpha but not for E545K, and decreased it for H1047R.
- E545K mutant was activated by H-Ras, whereas H1047R mutant was not.
Conclusions:
- PIK3CA helical domain mutants (E545K) appear constitutively active, mimicking growth factor signaling.
- PIK3CA kinase domain mutants (H1047R) mimic activation states similar to H-Ras signaling.
- These distinct activation mechanisms offer insights into differential therapeutic strategies for PIK3CA-driven cancers.
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