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Epigenetics in hyperhomocysteinemic states. A special focus on uremia
Diego Ingrosso1, Alessandra F Perna
1Department of Biochemistry and Biophysics "F. Cedrangolo", Second University of Naples, Italy. diego.ingrosso@unina2.it
Insights
Chronic kidney disease is linked to DNA hypomethylation due to elevated homocysteine. Folate therapy may reverse this epigenetic alteration, impacting gene expression in uremia.
Area of Science:
- Epigenetics
- Molecular Biology
- Nephrology
Background:
- Hyperhomocysteinemia is a cardiovascular risk factor linked to S-adenosylhomocysteine accumulation.
- S-adenosylhomocysteine inhibits methyltransferases, affecting DNA methylation.
- Inflammation and folate status influence DNA methylation in vivo.
Purpose of the Study:
- To review epigenetic control of gene expression via DNA methylation in chronic kidney disease (CKD) and uremia.
- To examine the role of hyperhomocysteinemia in DNA methylation abnormalities in CKD.
- To discuss the impact of homocysteine-lowering therapy on epigenetic modifications.
Main Methods:
- Review of existing literature on DNA methylation, hyperhomocysteinemia, and CKD.
- Analysis of studies involving cell culture, animal models, and human subjects.
- Examination of the biochemical pathways involving S-adenosylmethionine and S-adenosylhomocysteine.
Main Results:
- Hyperhomocysteinemia in CKD is associated with global DNA hypomethylation.
- Abnormal allelic gene expression linked to methylation is observed in uremia.
- Homocysteine-lowering therapy, particularly with folate, can reverse DNA methylation alterations.
Conclusions:
- Hyperhomocysteinemia significantly impacts DNA methylation in CKD and uremia.
- Epigenetic alterations in CKD are potentially reversible with homocysteine-lowering interventions.
- A link exists between epigenetic gene expression control and xenobiotic influences like folate therapy.
Abstract:
Aim of this article is to review the topic of epigenetic control of gene expression, especially regarding DNA methylation, in chronic kidney disease and uremia. Hyperhomocysteinemia is considered an independent cardiovascular risk factor, although the most recent intervention studies utilizing folic acid are negative. The accumulation of homocysteine in blood leads to an intracellular increase of S-adenosylhomocysteine (AdoHcy), a powerful competitive methyltransferase inhibitor, which is itself considered a predictor of cardiovascular events. The extent of methylation inhibition of each individual methyltransferase depends on the methyl donor S-adenosylmethionine (AdoMet) availability, on the [AdoMet]/[AdoHcy] ratio, and on the individual Km value for AdoMet and Ki for AdoHcy. DNA methyltransferases are among the principal targets of hyperhomocysteinemia, as studies in several cell culture and animal models, as well as in humans, almost unequivocally show. In vivo, DNA methylation may be also influenced by various factors in different tissues, for example by rate of cell growth, folate status, etc. and importantly inflammation. In chronic kidney disease and in uremia, hyperhomocysteinemia is commonly seen, and can be associated with global DNA hypomethylation, and with abnormal allelic expression of genes regulated through methylation. This alteration is susceptible of reversal upon homocysteine-lowering therapy obtained through folate administration. If this abnormality will translate itself in alterations of expression of genes relevant to the pathogenesis of this disease still remains to be established. In addition, these results establish a link between the epigenetic control of gene expression and xenobiotic influences, such as folate therapy.
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