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Epimutation at human chromosome 14q32.2 in a boy with a upd(14)mat-like clinical phenotype
U Zechner1, N Kohlschmidt, G Rittner
1Institute of Human Genetics, Johannes Gutenberg-University, Mainz, Germany. zechner@humgen.klinik.uni-mainz.de
Insights
A novel epimutation at chromosome 14q32.2 caused a maternal uniparental disomy 14 [upd(14)mat]-like phenotype. This finding expands the understanding of genetic causes for this rare condition.
Area of Science:
- Genetics
- Epigenetics
- Human Molecular Genetics
Background:
- Maternal uniparental disomy of chromosome 14 [upd(14)mat] is a rare genetic condition.
- Previous reports linked deletions and epimutations in the 14q32.2 region to upd(14)mat-like phenotypes.
Observation:
- A patient presented with a phenotype consistent with upd(14)mat, including low birth weight, hypotonia, and developmental delay.
- Standard cytogenetic and molecular analyses, including SNRPN methylation, were normal.
- Methylation analysis at 14q32.2 revealed significant hypomethylation in key differentially methylated regions.
Findings:
- The patient's condition was not caused by full or segmental upd(14)mat or a microdeletion at 14q32.2.
- A novel epimutation in the 14q32.2 imprinted region was identified as the cause of the upd(14)mat-like phenotype.
- This case highlights the role of epimutations in imprinting disorders.
Implications:
- Epimutations at 14q32.2 can mimic the clinical features of upd(14)mat.
- Accurate molecular diagnostics require comprehensive analysis of imprinting regions, including methylation studies.
- Further research is needed to understand the spectrum and mechanisms of 14q32.2 epimutations.
Abstract:
Recently, three reports described deletions and epimutations affecting the imprinted region at chromosome 14q32.2 in individuals with a phenotype typical for maternal uniparental disomy of chromosome 14 [upd(14)mat]. In this study, we describe another patient with upd(14)mat-like phenotype including low birth weight, neonatal feeding problems, muscular hypotonia, motor and developmental delay, small hands and feet, and truncal obesity. Conventional cytogenetic analyses, fluorescence in situ hybridization subtelomere screening, multiplex ligation-dependent probe amplification analysis of common microdeletion and microduplication syndromes, and methylation analysis of SNRPN all gave normal results. Methylation analysis at 14q32.2 revealed a gross hypomethylation of the differentially methylated regions (intergenic DMR and MEG3-DMR). Further molecular studies excluded full or segmental upd(14)mat as well as a microdeletion within this region. Evidently, the upd(14)mat-like clinical phenotype is caused by an epimutation at 14q32.2. The clinical and molecular features of this novel case are discussed with respect to the recently published cases.
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