Related Experiment Video
Updated: Jun 25, 2026

Multiplex PCR Assay for Typing of Staphylococcal Cassette Chromosome Mec Types I to V in Methicillin-resistant Staphylococcus aureus
Published on: September 5, 2013
Staphylococcus aureus MazF specifically cleaves a pentad sequence, UACAU, which is unusually abundant in the mRNA for
Ling Zhu1, Koichi Inoue, Satoshi Yoshizumi
1Department of Biochemistry, Robert Wood Johnson Medical School, 675 Hoes Lane, Piscataway, NJ 08854, USA.
Abstract:
Escherichia coli mRNA interferases, such as MazF and ChpBK, are sequence-specific endoribonucleases encoded by toxin-antitoxin (TA) systems present in its genome. A MazF homologue in Staphylococcus aureus (MazF(Sa)) has been shown to inhibit cell growth when induced in E. coli. Here, we determined the cleavage site for MazF(Sa) with the use of phage MS2 RNA as a substrate and CspA, an RNA chaperone, which prevents the formation of secondary structures in the RNA substrate. MazF(Sa) specifically cleaves the RNA at a pentad sequence, U downward arrow ACAU. Bioinformatics analysis revealed that this pentad sequence is significantly abundant in several genes, including the sraP gene in the S. aureus N315 strain. This gene encodes a serine-rich protein, which is known to play an important role in adhesion of the pathogen to human tissues and thus in endovascular infection. We demonstrated that the sraP mRNA became extremely unstable in comparison with the ompA mRNA only when MazF(Sa) was induced in E. coli. Further bioinformatics analysis indicated that the pentad sequence is also significantly abundant in the mRNAs for all the pathogenic factors in S. aureus. This observation suggests a possible regulatory relationship between the MazEF(Sa) TA module and the pathogenicity in S. aureus.
Insights
Staphylococcus aureus MazF (MazF(Sa)) cleaves RNA at UACAU, destabilizing virulence genes like sraP. This suggests the MazEF(Sa) toxin-antitoxin system may regulate S. aureus pathogenicity.
Area of Science:
- Microbiology
- Molecular Biology
- Genetics
Background:
- Toxin-antitoxin (TA) systems, including mRNA interferases like MazF, are found in Escherichia coli.
- A homologue, MazF(Sa), from Staphylococcus aureus inhibits E. coli growth.
- Understanding MazF(Sa) function is crucial for studying bacterial pathogenicity.
Purpose of the Study:
- To determine the specific RNA cleavage site of Staphylococcus aureus MazF (MazF(Sa)).
- To investigate the impact of MazF(Sa) on the stability of specific bacterial mRNAs.
- To explore the potential role of MazF(Sa) in regulating S. aureus virulence.
Main Methods:
- Enzymatic cleavage assays using phage MS2 RNA as a substrate.
- Employing CspA as an RNA chaperone to prevent secondary structure formation.
- Bioinformatics analysis to identify the abundance of the cleavage sequence in S. aureus genes.
Main Results:
- MazF(Sa) was identified to specifically cleave RNA at the pentameric sequence UACAU.
- Bioinformatics analysis revealed significant abundance of the UACAU sequence in S. aureus virulence-associated genes, including sraP.
- Induced expression of MazF(Sa) led to rapid degradation of sraP mRNA in E. coli.
Conclusions:
- MazF(Sa) targets the UACAU sequence, leading to mRNA destabilization.
- The prevalence of the UACAU sequence in virulence factor mRNAs suggests a regulatory role for MazF(Sa).
- The MazEF(Sa) TA system may be a key regulator of Staphylococcus aureus pathogenicity.
Related Concept Videos
Staphylococcal Skin Infections
Mechanism of Antibiotic Resistance in MRSA
Clinical Significance of Antibiotic Resistance
Determinants of Bacterial Pathogenicity and Virulence
Leaky Scanning
RNA Splicing

