Related Experiment Video
Updated: Jun 25, 2026

10:08
Experimental Design for Laser Microdissection RNA-Seq: Lessons from an Analysis of Maize Leaf Development
Published on: March 5, 2017
Mi-1.2 Transcripts Accumulate Ubiquitously in Resistant Lycopersicon esculentum
Journal of Nematology
|March 7, 2009
Summary
The tomato Mi-1.2 gene provides resistance to nematodes and aphids. Mi-1.2 gene expression was detected in resistant plants across various tissues, but not in susceptible ones, indicating its role in plant defense.
Area of Science:
- Plant genetics
- Molecular biology
- Crop protection
Background:
- The tomato Mi-1.2 gene is known to confer resistance against pests like root-knot nematodes and potato aphids.
- Differential resistance timing exists, with plants resistant to nematodes early but susceptible to aphids later.
Purpose of the Study:
- To investigate the transcriptional expression of the Mi-1.2 gene in tomato plants.
- To correlate Mi-1.2 gene expression patterns with observed resistance phenotypes against nematodes and aphids.
Main Methods:
- Reverse transcription polymerase chain reaction (RT-PCR) was employed to monitor Mi-1.2 gene expression.
- Expression levels were analyzed in both resistant (Mi/Mi) and susceptible (mi/mi) tomato cultivars.
- Gene expression was assessed across various plant tissues and developmental stages, with and without pest infestation.
Main Results:
- Mi-1.2 transcripts were found to accumulate in seeds, roots, stems, leaves, flowers, and green fruits of resistant tomato plants.
- No Mi-1.2 expression was detected in the corresponding organs of susceptible tomato plants.
- Mi-1.2 RNA was detectable early in root and leaf development and remained consistent regardless of nematode or aphid attack.
Conclusions:
- The Mi-1.2 gene is transcriptionally active in resistant tomato plants across multiple tissues and developmental stages.
- The presence of Mi-1.2 transcripts correlates with the plant's resistance to both root-knot nematodes and potato aphids.
- Expression of the Mi-1.2 gene appears constitutive and is not induced by pest infestation.
Related Concept Videos
MicroRNAs
MicroRNA (miRNA) are short, regulatory RNA transcribed from introns (non-coding regions of a gene) or intergenic regions (stretches of DNA present between genes). Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself, forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA...
MicroRNAs
MicroRNA (miRNA) are short, regulatory RNA transcribed from introns—non-coding regions of a gene—or intergenic regions—stretches of DNA present between genes. Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA ends...
Non-LTR Retrotransposons
As the name suggests, non-LTR retrotransposons lack the long terminal repeats characteristic of the LTR retrotransposons. Additionally, both LTR and non-LTR retrotransposons use distinct mechanisms of mobilization. Non-LTR retrotransposons are further divided into two classes - Long interspersed nuclear elements (LINEs) and short interspersed nuclear elements (SINEs), both of which occur abundantly in most mammals, including humans. Some of the active non-LTR retrotransposons in humans are L1...
Leaky Scanning
During most eukaryotic translation processes, the small 40S ribosome subunit scans an mRNA from its 5' end until it encounters the first start AUG codon. The large 60S ribosomal subunit then joins the smaller one to initiate protein synthesis. The location of the translation initiation is largely determined by the nucleotides near the start codon as there may be multiple translation initiation sites present on the mRNA. Marilyn Kozak discovered that the sequence RCCAUGG (where R stands for...
piRNA - Piwi-interacting RNAs
PIWI-interacting RNAs, or piRNAs, are the most abundant short non-coding RNAs. More than 20,000 genes have been found in humans that code for piRNAs while only 2000 genes have been found for miRNAs. piRNAs can act at the transcriptional and post-transcriptional levels and have a vital role in silencing transposable elements present in germ cells. They are also involved in epigenetic silencing and activation. Previously, they were thought to function only in germ cells but new evidence suggests...

