The alternative splice variant of DAPK-1, s-DAPK-1, induces proteasome-independent DAPK-1 destabilization
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Published on: November 22, 2024
Yao Lin1, Craig Stevens, Ben Harrison
1Institute of Genetics and Molecular Medicine, University of Edinburgh, UK.
Abstract:
Death-associated protein kinase 1 (DAPK-1) is a Ca(2+)/CaM-regulated kinase involved in multiple cellular signalling pathways that trigger cell survival, apoptosis, and autophagy. An alternatively spliced product expressed from the dapk1 locus, named s-DAPK-1, does not contain the kinase domain but has part of the DAPK-1 ankyrin-repeat and a novel polypeptide tail extension which is processed proteolytically in vivo. Cleavage of this polypeptide tail from s-DAPK-1 can regulate the ability of the protein to mimic one of the biological functions of DAPK-1 in promoting membrane blebbing. The full-length DAPK-1 protein is a relatively long-lived protein whose half-life is regulated by stress-activated signals from TNFR1 or HSP90 that can promote DAPK-1 protein degradation. Transfection of s-DAPK-1 into cells can also have a direct effect on DAPK-1 protein itself by promoting DAPK-1 de-stabilization. This effect does not require the novel polypeptide tail-extension of s-DAPK-1, as the core ankyrin-repeat containing region of s-DAPK-1 is sufficient to promote DAPK-1 protein de-stabilization. Conversely, the minimal domain on full-length DAPK-1 that responds to the effect of s-DAPK-1 is not the ankyrin-repeat domain but the core kinase domain of DAPK-1. The de-stabilization of DAPK-1 by s-DAPK-1 is not dependent upon the proteasome. However, s-DAPK-1 itself is a very short-lived protein which is regulated by a proteasomal-dependent pathway. Together, these data identify a novel function of s-DAPK-1 in controlling the half-life of DAPK-1 protein itself and indicate that the degradation of each gene product is controlled by two distinct degradation pathways.
Insights
A novel splice variant, s-DAPK-1, destabilizes Death-associated protein kinase 1 (DAPK-1) protein levels through a non-proteasomal pathway, revealing distinct degradation mechanisms for related gene products.
Area of Science:
- Molecular Biology
- Cell Biology
- Biochemistry
Background:
- Death-associated protein kinase 1 (DAPK-1) is a Ca(2+)/CaM-regulated kinase crucial for cell survival, apoptosis, and autophagy.
- Alternative splicing of the dapk1 locus produces s-DAPK-1, lacking a kinase domain but retaining ankyrin repeats and a novel polypeptide tail.
Purpose of the Study:
- To investigate the novel function of s-DAPK-1 in regulating DAPK-1 protein stability.
- To elucidate the distinct degradation pathways for DAPK-1 and s-DAPK-1.
Main Methods:
- Cell transfection experiments to introduce s-DAPK-1.
- Analysis of DAPK-1 and s-DAPK-1 protein half-lives and degradation pathways.
- Domain mapping to identify regions responsible for protein-protein interactions and degradation.
Main Results:
- s-DAPK-1 directly promotes DAPK-1 destabilization via its ankyrin-repeat region, independent of its tail extension.
- DAPK-1 destabilization by s-DAPK-1 is not proteasome-dependent.
- s-DAPK-1 is a short-lived protein degraded through a proteasomal pathway.
Conclusions:
- s-DAPK-1 possesses a novel function in controlling DAPK-1 protein half-life.
- DAPK-1 and s-DAPK-1 are subject to distinct protein degradation mechanisms.
- This highlights complex post-transcriptional regulation within the dapk1 gene locus.
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